Evidence map›Paper›PMID 32734669›Full record

ArticleChembiochem : a European journal of chemical biology2020

An Engineered Escherichia coli Strain with Synthetic Metabolism for in-Cell Production of Translationally Active Methionine Derivatives.

Christian Johannes Schipp, Ying Ma, Ammar Al-Shameri, Federico D'Alessio, Peter Neubauer, Roberto Contestabile, Nediljko Budisa, Martino Luigi di Salvo

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Advances in adaptive laboratory evolution applications forSynthetic and systems biotechnology · 2025
    Review
  3. In Vivo Biosynthesis and Direct Incorporation of Noncanonical Amino Acids into Proteins.Chembiochem : a European journal of chemical biology · 2025
    Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Engineering of methionine-auxotrophMetabolic engineering communications · 2024
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Christian Johannes SchippChair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin ACK 24, Ackerstraße 76, 13355, Berlin, Germany.
Ying MaParaxel International GmbH, Berlin, Campus DRK Kliniken Berlin Westend Haus 18, Spandauer Damm 130, 14050, Berlin, Germany.
Ammar Al-ShameriInstitut für Chemie, Technische Universität Berlin, Müller-Breslau-Straße. 10, 10623, Berlin, Germany.
Federico D'AlessioDipartimento di Scienze Biochimiche "A. Rossi Fanelli", Sapienza Università di Roma, Piazzale Aldo Moro, 5 - Edificio CU20, 00185, Roma, Italy.
Peter NeubauerChair of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin ACK 24, Ackerstraße 76, 13355, Berlin, Germany.
Roberto ContestabileDipartimento di Scienze Biochimiche "A. Rossi Fanelli", Sapienza Università di Roma, Piazzale Aldo Moro, 5 - Edificio CU20, 00185, Roma, Italy.
Nediljko BudisaInstitut für Chemie, Technische Universität Berlin, Müller-Breslau-Straße. 10, 10623, Berlin, Germany.
Martino Luigi di SalvoDipartimento di Scienze Biochimiche "A. Rossi Fanelli", Sapienza Università di Roma, Piazzale Aldo Moro, 5 - Edificio CU20, 00185, Roma, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last decades, it has become clear that the canonical amino acid repertoire codified by the universal genetic code is not up to the needs of emerging biotechnologies. For this reason, extensive genetic code re-engineering is essential to expand the scope of ribosomal protein translation, leading to reprogrammed microbial cells equipped with an alternative biochemical alphabet to be exploited as potential factories for biotechnological purposes. The prerequisite for this to happen is a continuous intracellular supply of noncanonical amino acids through synthetic metabolism from simple and cheap precursors. We have engineered an Escherichia coli bacterial system that fulfills these requirements through reconfiguration of the methionine biosynthetic pathway and the introduction of an exogenous direct trans-sulfuration pathway. Our metabolic scheme operates in vivo, rescuing intermediates from core cell metabolism and combining them with small bio-orthogonal compounds. Our reprogrammed E. coli strain is capable of the in-cell production of l-azidohomoalanine, which is directly incorporated into proteins in response to methionine codons. We thereby constructed a prototype suitable for economic, versatile, green sustainable chemistry, pushing towards enzyme chemistry and biotechnology-based production.

Indexed as

Metabolic EngineeringEscherichia coliMethionineMolecular StructureMethionineclick chemistrygenetic code expansiongreen chemistrymetabolic engineeringnoncanonical amino acidstrans-sulfuration.

Identifiers

PMID32734669
PMCPMC7756864

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.