Evidence map›Paper›PMID 32734321›Full record

ArticleArchives of microbiology2020

Identification of bacteria and fungi inhabiting fruiting bodies of Burgundy truffle (Tuber aestivum Vittad.).

Urszula Perlińska-Lenart, Sebastian Piłsyk, Elżbieta Gryz, Jadwiga Turło, Dorota Hilszczańska, Joanna S Kruszewska

Abstract read
In one paragraph

Article in Archives of microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
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  5. Phytotoxic Strains ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Transcriptome Metabolic Characterization ofInternational journal of molecular sciences · 2023
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Urszula Perlińska-LenartInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Sebastian PiłsykInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Elżbieta GryzInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Jadwiga TurłoDepartment of Drug Technology and Pharmaceutical Biotechnology, Medical University of Warsaw, Warsaw, Poland.
Dorota HilszczańskaDepartment of Forest Ecology, Forest Research Institute, Sękocin Stary, Poland. d.hilszczanska@ibles.waw.pl.ORCID http://orcid.org/0000-0002-4363-704X
Joanna S KruszewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.

Funding

the State Forests National Forest Holding OR-271.3.5.2017
6 · The paper itself

Abstract

Tuber species may be regarded as complex microhabitats hosting diverse microorganisms inside their fruiting bodies. Here, we investigated the structure of microbial communities inhabiting the gleba of wild growing (in stands) T. aestivum, using Illumina sequencing and culture-based methods. The two methods used in combination allowed to extract more information on complex microbiota of Tuber aestivum gleba. Analysis of the V3-V4 region of 16S rDNA identified nine phyla of bacteria present in the gleba of T. aestivum ascomata, mostly Proteobacteria from the family Bradyrhizobiaceae. Our results ideally match the earlier data for other Tuber species where the family Bradyrhizobiaceae was the most represented. The ITS1 region of fungal rDNA represented six alien fungal species belonging to three phyla. To complement the metagenomic analysis, cultivable fungi and bacteria were obtained from the gleba of the same T. aestivum fruiting bodies. The identified fungi mostly belong to the phylum Basidiomycota and same to Ascomycota. Analysis of cultivable bacteria revealed that all the specimens were colonized by different strains of Bacillus. Fungal community inhabiting T. aestivum fruiting bodies was never shown before.

Indexed as

AscomycotaBacillusBasidiomycotaBradyrhizobiaceaeDNA, RibosomalFruiting Bodies, FungalHigh-Throughput Nucleotide SequencingMicrobiotaDNA, RibosomalBacterial microbiomeCultivable microorganismsFungal microbiomeMetagenomics analysisTuber aestivum

Identifiers

PMID32734321
PMCPMC7538415

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.