Evidence map›Paper›PMID 32734287›Full record

ArticleJournal of experimental botany2020

Generating and characterizing single- and multigene mutants of the Rubisco small subunit family in Arabidopsis.

Panupon Khumsupan, Marta A Kozlowska, Douglas J Orr, Andreas I Andreou, Naomi Nakayama, Nicola Patron, Elizabete Carmo-Silva, Alistair J McCormick

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Small subunit isoform diversity underlies structural heterogeneity in native plant Rubisco.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Rewinding evolution in planta: A Rubisco-null platform validates high-performance ancestral enzymes.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Panupon KhumsupanSynthSys & Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Marta A KozlowskaSynthSys & Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Douglas J OrrLancaster Environment Centre, Lancaster University, Lancaster, UK.
Andreas I AndreouSynthSys & Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Naomi NakayamaSynthSys & Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Nicola PatronEarlham Institute, Norwich Research Park, Norwich, UK.
Elizabete Carmo-SilvaLancaster Environment Centre, Lancaster University, Lancaster, UK.
Alistair J McCormickSynthSys & Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
University of Edinburgh · GBLancaster University · GBNorwich Research Park · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I024488/1Biotechnology and Biological Sciences Research Council BB/L014130/1Biotechnology and Biological Sciences Research Council BB/M006468/1Biotechnology and Biological Sciences Research Council BB/S015531/1
6 · The paper itself

Abstract

The primary CO2-fixing enzyme Rubisco limits the productivity of plants. The small subunit of Rubisco (SSU) can influence overall Rubisco levels and catalytic efficiency, and is now receiving increasing attention as a potential engineering target to improve the performance of Rubisco. However, SSUs are encoded by a family of nuclear rbcS genes in plants, which makes them challenging to engineer and study. Here we have used CRISPR/Cas9 [clustered regularly interspaced palindromic repeats (CRISPR)/CRISPR-associated protein 9] and T-DNA insertion lines to generate a suite of single and multiple gene knockout mutants for the four members of the rbcS family in Arabidopsis, including two novel mutants 2b3b and 1a2b3b. 1a2b3b contained very low levels of Rubisco (~3% relative to the wild-type) and is the first example of a mutant with a homogenous Rubisco pool consisting of a single SSU isoform (1B). Growth under near-outdoor levels of light demonstrated Rubisco-limited growth phenotypes for several SSU mutants and the importance of the 1A and 3B isoforms. We also identified 1a1b as a likely lethal mutation, suggesting a key contributory role for the least expressed 1B isoform during early development. The successful use of CRISPR/Cas here suggests that this is a viable approach for exploring the functional roles of SSU isoforms in plants.

Indexed as

ArabidopsisRibulose-Bisphosphate CarboxylaseCRISPR-Cas SystemsGene Knockout TechniquesMutationPhenotypeRibulose-Bisphosphate CarboxylaseArabidopsis thalianachloroplastCRISPR/Cas9photosynthesisprotoplastsRubiscoSpCas9T-DNA

Identifiers

PMID32734287
OpenAlexW3039958730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.