Evidence map›Paper›PMID 32732998›Full record

ArticleNature communications2020

Structural signatures in EPR3 define a unique class of plant carbohydrate receptors.

Jaslyn E M M Wong, Kira Gysel, Thea G Birkefeldt, Maria Vinther, Artur Muszyński, Parastoo Azadi, Nick S Laursen, John T Sullivan, Clive W Ronson, Jens Stougaard and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Review
  3. Plant cell surface receptors.The Plant journal : for cell and molecular biology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Signaling in Legume-Rhizobia Symbiosis.International journal of molecular sciences · 2023
    Review
  8. Plant lysin motif extracellular proteins are required for arbuscular mycorrhizal symbiosis.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Review
  11. Review
  12. Regulated processing and secretion of a peptide precursor in cilia.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Jaslyn E M M WongDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.ORCID http://orcid.org/0000-0003-4017-3283
Kira GyselDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.ORCID http://orcid.org/0000-0003-4245-9998
Thea G BirkefeldtDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.
Maria VintherDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.
Artur MuszyńskiComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-3497-9977
Parastoo AzadiComplex Carbohydrate Research Center, University of Georgia, Athens, GA, 30602, USA.
Nick S LaursenDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.
John T SullivanDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9054, New Zealand.
Clive W RonsonDepartment of Microbiology and Immunology, University of Otago, Dunedin, 9054, New Zealand.ORCID http://orcid.org/0000-0002-2217-9676
Jens StougaardDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark.ORCID http://orcid.org/0000-0002-9312-2685
Kasper R AndersenDepartment of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark. kra@mbg.au.dk.ORCID http://orcid.org/0000-0002-4415-8067
Aarhus University · DKUniversity of Georgia · USUniversity of Otago · NZMRC Laboratory of Molecular Biology · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Receptor-mediated perception of surface-exposed carbohydrates like lipo- and exo-polysaccharides (EPS) is important for non-self recognition and responses to microbial associated molecular patterns in mammals and plants. In legumes, EPS are monitored and can either block or promote symbiosis with rhizobia depending on their molecular composition. To establish a deeper understanding of receptors involved in EPS recognition, we determined the structure of the Lotus japonicus (Lotus) exopolysaccharide receptor 3 (EPR3) ectodomain. EPR3 forms a compact structure built of three putative carbohydrate-binding modules (M1, M2 and LysM3). M1 and M2 have unique βαββ and βαβ folds that have not previously been observed in carbohydrate binding proteins, while LysM3 has a canonical βααβ fold. We demonstrate that this configuration is a structural signature for a ubiquitous class of receptors in the plant kingdom. We show that EPR3 is promiscuous, suggesting that plants can monitor complex microbial communities though this class of receptors.

Indexed as

Amino Acid SequenceLipopolysaccharidesLotusMesorhizobiumNitrogen FixationPlant ProteinsProtein FoldingRoot Nodules, PlantSymbiosislipid-linked oligosaccharidesLipopolysaccharidesPlant Proteins

Identifiers

PMID32732998
PMCPMC7392887
OpenAlexW3046138076

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.