Evidence map›Paper›PMID 32732362›Full record

ArticleHaematologica2021

Genetic manipulation of primary human natural killer cells to investigate the functional and oncogenic roles of PRDM1.

Gehong Dong, Yuping Li, Logan Lee, Xuxiang Liu, Yunfei Shi, Xiaoqian Liu, Alyssa Bouska, Qiang Gong, Lingbo Kong, Jinhui Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Genetic and Epigenetic Aberrations ofCurrent issues in molecular biology · 2025
    Article
  4. Article
  5. Natural Killer Cell-Based Immunotherapy against Glioblastoma.International journal of molecular sciences · 2023
    Review
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Gehong DongDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Yuping LiDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Logan LeeDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Xuxiang LiuDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Yunfei ShiDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Xiaoqian LiuDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Alyssa BouskaPathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Qiang GongDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Lingbo KongDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Jinhui WangDepartment of Mol and Cell Biol , City of Hope National Medical Center, Duarte, CA 91010, USA.
Chih-Hong LouThe Gene Editing and Viral Vector Core, City of Hope National Medical Center, Duarte, CA 91010, USA.
Timothy W McKeithanDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
Javeed IqbalPathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Wing C ChanDepartment of Pathology, City of Hope National Medical Center, Duarte, CA 91010, USA.
City Of Hope National Medical Center · USUniversity of Nebraska Medical Center · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI STANLEY R. HAMILTON · 1985 to 2026
$86.3M
Preclinical Models and Therapeutics CoreP01CA229100 · NCI · MAYO CLINIC ARIZONA · PI INGHIRAMI, GIORGIO · 2018 to 2022
$10.2M
NCI NIH HHS P01 CA229100NCI NIH HHS P30 CA033572
6 · The paper itself

Abstract

Extra-nodal natural killer/T-cell lymphoma, nasal type (ENKTCL) is a highly aggressive lymphoma, where the tumor suppressor gene (TSG) PRDM1 is frequently lost/inactivated. We employed two different CRISPR/Cas9 approaches to generate PRDM1-/- primary NK cells to study its role in NK-cell homeostasis. PRDM1-/- NK cells showed a marked increase in cloning efficiency, higher proliferation rate and less apoptosis compared with their wild type counterparts. Gene expression profiling demonstrated a marked enrichment in pathways associated with proliferation, cell cycle, MYC, MYB and TCR/NK signaling in PRDM1-/- NK cells, but pathways associated with normal cellular functions including cytotoxic functions were down-regulated, suggesting that the loss of PRDM1 shifted NK cells toward proliferation and survival rather than the performance of its normal functions. We were also able to further modify a PRDM1 deleted clone to introduce heterozygous deletions of common TSG in ENKTCL such as TP53, DDX3X, or PTPN6. We have established an in vitro model to elucidate the major pathways through which PRDM1 mediates its homeostatic control of NK-cells. This approach can be applied to the study of other relevant genetic lesions and oncogenic collaborations in lymphoma pathogenesis.

Indexed as

CarcinogenesisGene Expression Regulation, NeoplasticKiller Cells, NaturalPositive Regulatory Domain I-Binding Factor 1Cell Line, TumorGene Expression ProfilingHumansLymphoma, Extranodal NK-T-CellPositive Regulatory Domain I-Binding Factor 1PRDM1 protein, human

Identifiers

PMID32732362
PMCPMC8409030
OpenAlexW3046734071

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.