Evidence map›Paper›PMID 32732040›Full record

ArticleEnzyme and microbial technology2020

Identification and catalytic properties of new epoxide hydrolases from the genomic data of soil bacteria.

Gorjan Stojanovski, Dragana Dobrijevic, Helen C Hailes, John M Ward

Open access · hybridAbstract read
In one paragraph

Article in Enzyme and microbial technology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

  1. The Impact of Metagenomics on Biocatalysis.Angewandte Chemie (International ed. in English) · 2024
    Review
  2. Epoxide Hydrolases: Multipotential Biocatalysts.International journal of molecular sciences · 2023
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gorjan StojanovskiDepartment of Biochemical Engineering, University College London, Bernard Katz, London WC1E 6BT, UK. Electronic address: gorjan.stojanovski.17@ucl.ac.uk.
Dragana DobrijevicDepartment of Biochemical Engineering, University College London, Bernard Katz, London WC1E 6BT, UK. Electronic address: d.dobrijevic@ucl.ac.uk.
Helen C HailesDepartment of Chemistry, University College London, 20 Gordon Street, London, WC1H 0AJ, UK. Electronic address: h.c.hailes@ucl.ac.uk.
John M WardDepartment of Biochemical Engineering, University College London, Bernard Katz, London WC1E 6BT, UK. Electronic address: j.ward@ucl.ac.uk.
University College London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Epoxide hydrolases (EHs) catalyse the conversion of epoxides into vicinal diols. These enzymes have extensive value in biocatalysis as they can generate enantiopure epoxides and diols which are important and versatile synthetic intermediates for the fine chemical and pharmaceutical industries. Despite these benefits, they have seen limited use in the bioindustry and novel EHs continue to be reported in the literature. We identified twenty-nine putative EHs within the genomes of soil bacteria. Eight of these EHs were explored in terms of their activity. Two limonene epoxide hydrolases (LEHs) and one ⍺/β EH were active on a model compound styrene oxide and its ring-substituted derivatives, with low to good percentage conversions of 18-86%. Further exploration of the substrate scope with enantiopure (R)-styrene oxide and (S)-styrene oxide, showed different epoxide ring opening regioselectivities. Two enzymes, expressed from plasmids pQR1984 and pQR1990 de-symmetrised the meso-epoxide cyclohexene oxide, forming the (R,R)-diol with high enantioselectivity. Two LEHs, from plasmids pQR1980 and pQR1982 catalysed the hydrolysis of (+) and (-) limonene oxide, with diastereomeric preference for the (1S,2S,4R)- and (1R,2R,4S)-diol products, respectively. The enzyme from plasmid pQR1982 had a good substrate scope for a LEH, being active towards styrene oxide, its analogues, cyclohexene oxide and 1,2-epoxyhexane in addition to (±)-limonene oxide. The enzymes from plasmids pQR1982 and pQR1984 had good substrate scopes and their enzymatic properties were characterised with respect to styrene oxide. They had comparable temperature optima and pQR1984 had 70% activity in the presence of 40% of the green solvent MeOH, a useful property for bio-industrial applications. Overall, this study has provided novel EHs with potential value in industrial biocatalysis.

Indexed as

Genome, BacterialSoil MicrobiologyBacteriaBiocatalysisBiotransformationData MiningEpoxide HydrolasesEpoxy CompoundsEscherichia coliHydrolysisStereoisomerismSubstrate SpecificityEpoxide HydrolasesEpoxy CompoundsBiotransformationEpoxide hydrolaseGenome miningLimonene epoxide hydrolase

Identifiers

PMID32732040
PMCPMC7429986
OpenAlexW3024409056

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.