Evidence map›Paper›PMID 32730789›Full record

ArticleBiophysical journal2020

Cryo-EM and Molecular Docking Shows Myosin Loop 4 Contacts Actin and Tropomyosin on Thin Filaments.

Matthew H Doran, Elumalai Pavadai, Michael J Rynkiewicz, Jonathan Walklate, Esther Bullitt, Jeffrey R Moore, Michael Regnier, Michael A Geeves, William Lehman

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Structural and Functional Properties of Kappa Tropomyosin.International journal of molecular sciences · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Matthew H DoranDepartment of Physiology & Biophysics, Boston University School of Medicine, Boston, Massachusetts.
Elumalai PavadaiDepartment of Physiology & Biophysics, Boston University School of Medicine, Boston, Massachusetts.
Michael J RynkiewiczDepartment of Physiology & Biophysics, Boston University School of Medicine, Boston, Massachusetts.
Jonathan WalklateSchool of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Esther BullittDepartment of Physiology & Biophysics, Boston University School of Medicine, Boston, Massachusetts.
Jeffrey R MooreDepartment of Biological Sciences, University of Massachusetts-Lowell, Lowell, Massachusetts.
Michael RegnierDepartment of Bioengineering, University of Washington, Seattle, Washington.
Michael A GeevesSchool of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
William LehmanDepartment of Physiology & Biophysics, Boston University School of Medicine, Boston, Massachusetts. Electronic address: wlehman@bu.edu.
Boston University · USUniversity of Kent · GBUniversity of Massachusetts Lowell · USUniversity of Washington · US

Funding

The Stanford-SLAC CryoEM Center supplementU24GM129541 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH, HEDMAN, BRITT · 2018 to 2023
$54.8M
MYOSIN GENE DIVERSITY AND FUNCTIONR01GM029090 · NIGMS · YESHIVA UNIVERSITY · PI Leslie Anne Leinwand · 1985 to 2026
$12.3M
From proteins to cells to tissues: A multi-scale assessment of biomechanical regulation by the myosin molecular motorRM1GM131981 · NIGMS · STANFORD UNIVERSITY · PI BERNSTEIN, DANIEL, MACK, DAVID LEE · 2019 to 2023
$10.3M
UW Center for Translational Muscle Research (Overall Application)P30AR074990 · NIAMS · UNIVERSITY OF WASHINGTON · PI Jennifer Michelle Davis, DANIEL RAFTERY · 2019 to 2026
$7.5M
THIN FILAMENTS AND VERTEBRATE SMOOTH MUSCLE CONTRACTIONR01HL036153 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI William J Lehman · 1986 to 2026
$6.5M
Engineered Stem Cells for Cardiac RepairR01HL128368 · NHLBI · UNIVERSITY OF WASHINGTON · PI REGNIER, MICHAEL · 2018 to 2025
$6.1M
Training Program in Cardiovascular Biology: Pre-DoctoralT32HL007969 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI RAVID, KATYA · 2003 to 2019
$3.2M
CryoEM Data Collection Facility Consortium at NCMIU24GM116787 · NIGMS · STANFORD UNIVERSITY · PI BULLITT, ESTHER, CHIU, WAH · 2016 to 2020
$3.1M
Acquisition of a 300 kV Electron Microscope for Structural BiologyS10OD021600 · OD · STANFORD UNIVERSITY · PI CHIU, WAH · 2016 to 2016
$2.0M
Cooperativity in the Cardiac Myofilament Interactome in Health and DiseaseR01HL123774 · NHLBI · UNIVERSITY OF MASSACHUSETTS LOWELL · PI MOORE, JEFFREY R · 2016 to 2019
$1.6M
Improved data collection for FEI TF20 and Philips CM12 electron microscopesS10RR025434 · NCRR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BULLITT, ESTHER · 2009 to 2009
$263k
NCRR NIH HHS S10 RR025434NHLBI NIH HHS R01 HL036153NHLBI NIH HHS R01 HL123774NHLBI NIH HHS R01 HL128368NHLBI NIH HHS T32 HL007969NIAMS NIH HHS P30 AR074990NIGMS NIH HHS R01 GM029090NIGMS NIH HHS RM1 GM131981NIGMS NIH HHS U24 GM116787NIGMS NIH HHS U24 GM129541NIH HHS S10 OD021600
6 · The paper itself

Abstract

The motor protein myosin drives muscle and nonmuscle motility by binding to and moving along actin of thin filaments. Myosin binding to actin also modulates interactions of the regulatory protein, tropomyosin, on thin filaments, and conversely tropomyosin affects myosin binding to actin. Insight into this reciprocity will facilitate a molecular level elucidation of tropomyosin regulation of myosin interaction with actin in muscle contraction, and in turn, promote better understanding of nonmuscle cell motility. Indeed, experimental approaches such as fiber diffraction, cryoelectron microscopy, and three-dimensional reconstruction have long been used to define regulatory interaction of tropomyosin and myosin on actin at a structural level. However, their limited resolution has not proven sufficient to determine tropomyosin and myosin contacts at an atomic-level and thus to fully substantiate possible functional contributions. To overcome this deficiency, we have followed a hybrid approach by performing new cryogenic electron microscopy reconstruction of myosin-S1-decorated F-actin-tropomyosin together with atomic scale protein-protein docking of tropomyosin to the EM models. Here, cryo-EM data were derived from filaments reconstituted with α1-actin, cardiac αα-tropomyosin, and masseter muscle β-myosin complexes; masseter myosin, which shares sequence identity with β-cardiac myosin-heavy chain, was used because of its stability in vitro. The data were used to build an atomic model of the tropomyosin cable that fits onto the actin filament between the tip of the myosin head and a cleft on the innermost edge of actin subunits. The docking and atomic scale fitting showed multiple discrete interactions of myosin loop 4 and acidic residues on successive 39-42 residue-long tropomyosin pseudorepeats. The contacts between S1 and tropomyosin on actin appear to compete with and displace ones normally found between actin and tropomyosin on myosin-free thin filaments in relaxed muscle, thus restructuring the filament during myosin-induced activation.

Indexed as

ActinsTropomyosinActin CytoskeletonCryoelectron MicroscopyMolecular Docking SimulationMyosinsActinsMyosinsTropomyosin

Identifiers

PMID32730789
PMCPMC7451941
OpenAlexW3043121751

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.