Evidence map›Paper›PMID 32728345›Full record

ArticleData mining and knowledge discovery2019

Dynamics reconstruction and classification via Koopman features.

Wei Zhang, Yao-Chsi Yu, Jr-Shin Li

Open access · greenAbstract read
In one paragraph

Article in Data mining and knowledge discovery, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 9 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Wei ZhangWashington University in St. Louis, St. Louis, USA.
Yao-Chsi YuWashington University in St. Louis, St. Louis, USA.
Jr-Shin LiWashington University in St. Louis, St. Louis, USA.ORCID 0000-0001-6693-3979
Washington University in St. Louis · US

Funding

Collaborative Research: Inferring Dynamic Topology to Decode and Control Spatiotemporal Structures in Complex NetworksR01GM131403 · NIGMS · WASHINGTON UNIVERSITY · PI LI, JR-SHIN · 2018 to 2021
$1.6M
Spatiotemporal control of large neuronal networks using high dimensional optimizationR21EY027590 · NEI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHING, SHINUNG, LI, JR-SHIN · 2016 to 2017
$493k
NEI NIH HHS R21 EY027590NIGMS NIH HHS R01 GM131403
6 · The paper itself

Abstract

Knowledge discovery and information extraction of large and complex datasets has attracted great attention in wide-ranging areas from statistics and biology to medicine. Tools from machine learning, data mining, and neurocomputing have been extensively explored and utilized to accomplish such compelling data analytics tasks. However, for time-series data presenting active dynamic characteristics, many of the state-of-the-art techniques may not perform well in capturing the inherited temporal structures in these data. In this paper, integrating the Koopman operator and linear dynamical systems theory with support vector machines, we develop an ovel dynamic data mining framework to construct low-dimensional linear models that approximate the nonlinear flow of high-dimensional time-series data generated by unknown nonlinear dynamical systems. This framework then immediately enables pattern recognition, e.g., classification, of complex time-series data to distinguish their dynamic behaviors by using the trajectories generated by the reduced linear systems. Moreover, we demonstrate the applicability and efficiency of this framework through the problems of time-series classification in bioinformatics and healthcare, including cognitive classification and seizure detection with fMRI and EEG data, respectively. The developed Koopman dynamic learning framework then lays a solid foundation for effective dynamic data mining and promises a mathematically justified method for extracting the dynamics and significant temporal structures of nonlinear dynamical systems.

Indexed as

BioinformaticsData-driven methodsDimensionality reductionDynamic data miningHealthcareKoopman operatorsSpectral methodsTime-series classification

Identifiers

PMID32728345
PMCPMC7390473
OpenAlexW2955512156

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.