Evidence map›Paper›PMID 32727879›Full record

ArticleJournal of virology2020

NKNK: a New Essential Motif in the C-Terminal Domain of HIV-1 Group M Integrases.

Marine Kanja, Pierre Cappy, Nicolas Levy, Oyndamola Oladosu, Sylvie Schmidt, Paola Rossolillo, Flore Winter, Romain Gasser, Christiane Moog, Marc Ruff and 2 more

Abstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marine KanjaUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France.
Pierre CappyUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France.ORCID 0000-0001-8540-2196
Nicolas LevyChromatin Stability and DNA Mobility, Department of Integrated Structural Biology, IGBMC, Strasbourg University, CNRS, INSERM, Illkirch, France.
Oyndamola OladosuChromatin Stability and DNA Mobility, Department of Integrated Structural Biology, IGBMC, Strasbourg University, CNRS, INSERM, Illkirch, France.
Sylvie SchmidtMolecular Immuno-Rheumatology Laboratory, UMR1109, FMTS, Université de Strasbourg, INSERM, Institut de Virologie, Strasbourg, France.
Paola RossolilloUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France.
Flore WinterUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France.
Romain GasserUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France.
Christiane MoogMolecular Immuno-Rheumatology Laboratory, UMR1109, FMTS, Université de Strasbourg, INSERM, Institut de Virologie, Strasbourg, France.ORCID 0000-0002-0916-156X
Marc RuffChromatin Stability and DNA Mobility, Department of Integrated Structural Biology, IGBMC, Strasbourg University, CNRS, INSERM, Illkirch, France.
Matteo NegroniUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France m.negroni@ibmc-cnrs.unistra.fr d.lener@ibmc-cnrs.unistra.fr.ORCID 0000-0003-3005-8871
Daniela LenerUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, Strasbourg, France m.negroni@ibmc-cnrs.unistra.fr d.lener@ibmc-cnrs.unistra.fr.ORCID 0000-0001-8266-8810

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using coevolution network interference based on comparison of two phylogenetically distantly related isolates, one from the main group M and the other from the minor group O of HIV-1, we identify, in the C-terminal domain (CTD) of integrase, a new functional motif constituted by four noncontiguous amino acids (N

Indexed as

Amino Acid MotifsCell Line, TumorHEK293 CellsHIV-1HIV IntegraseHumansProtein DomainsHIV Integraseevolutionhuman immunodeficiency virusintegrasephylogenetic groups

Identifiers

PMID32727879
PMCPMC7527040

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.