Evidence map›Paper›PMID 32727875›Full record

ArticleJournal of virology2020

Contribution of Segment 3 to the Acquisition of Virulence in Contemporary H9N2 Avian Influenza Viruses.

Anabel L Clements, Joshua E Sealy, Thomas P Peacock, Jean-Remy Sadeyen, Saira Hussain, Samantha J Lycett, Holly Shelton, Paul Digard, Munir Iqbal

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Anabel L ClementsThe Pirbright Institute, Pirbright, Woking, United Kingdom.
Joshua E SealyThe Pirbright Institute, Pirbright, Woking, United Kingdom.
Thomas P PeacockThe Pirbright Institute, Pirbright, Woking, United Kingdom.ORCID 0000-0001-7077-2928
Jean-Remy SadeyenThe Pirbright Institute, Pirbright, Woking, United Kingdom.
Saira HussainThe Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom.
Samantha J LycettThe Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom.
Holly SheltonThe Pirbright Institute, Pirbright, Woking, United Kingdom.ORCID 0000-0002-5776-0735
Paul DigardThe Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-0872-9440
Munir IqbalThe Pirbright Institute, Pirbright, Woking, United Kingdom Munir.iqbal@pirbright.ac.uk.ORCID 0000-0001-5165-5339
The Pirbright Institute · GBRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L018853/1Biotechnology and Biological Sciences Research Council BB/P013740/1Biotechnology and Biological Sciences Research Council BB/P016472/1Biotechnology and Biological Sciences Research Council BB/R012679/1Biotechnology and Biological Sciences Research Council BB/S011269/1Biotechnology and Biological Sciences Research Council BB/S013792/1Biotechnology and Biological Sciences Research Council BBS/E/I/00001981Biotechnology and Biological Sciences Research Council BBS/E/I/00007030Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007035Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Medical Research Council MR/M011747/1
6 · The paper itself

Abstract

H9N2 avian influenza viruses (AIVs) circulate in poultry throughout much of Asia, the Middle East, and Africa. These viruses cause huge economic damage to poultry production systems and pose a zoonotic threat both in their own right and in the generation of novel zoonotic viruses, for example, H7N9. In recent years, it has been observed that H9N2 viruses have further adapted to gallinaceous poultry, becoming more highly transmissible and causing higher morbidity and mortality. Here, we investigate the molecular basis for this increased virulence, comparing a virus from the 1990s and a contemporary field strain. The modern virus replicated to higher titers in various systems, and this difference mapped to a single amino acid polymorphism at position 26 of the endonuclease domain shared by the PA and PA-X proteins. This change was responsible for increased replication and higher morbidity and mortality rates along with extended tissue tropism seen in chickens. Although the PA K26E change correlated with increased host cell shutoff activity of the PA-X protein

Indexed as

Influenza A Virus, H9N2 SubtypeInfluenza in BirdsPoultry DiseasesRNA-Dependent RNA PolymeraseViral ProteinsViral TropismAnimalsChickensDogsHEK293 CellsHumansMadin Darby Canine Kidney CellsPA protein, influenza virusesRNA-Dependent RNA PolymeraseViral Proteinsavian influenza viruseschickenH9N2increased virulencePA polymerase gene mutationpoultry

Identifiers

PMID32727875
PMCPMC7527061
OpenAlexW3046180128

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.