Evidence map›Paper›PMID 32727063›Full record

ArticleAnimals : an open access journal from MDPI2020

Transcriptome Profiling Associated with Carcass Quality of Loin Muscles in Crossbred Pigs.

Sang-Mo Kim, Kesavan Markkandan, Jong-Young Lee, Gye-Woong Kim, Jae Young Yoo

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. New Genotype ofFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sang-Mo KimDepartment of Animal Resources Science, College of Industrial Sciences, Kongju National University, Yesan-eup, Yesan-gun, Chungcheongnam-do 32588, Korea.
Kesavan MarkkandanOneomics Co Ltd., Bucheon-si, Gyeonggi-do 14585, Korea.
Jong-Young LeeOneomics Co Ltd., Bucheon-si, Gyeonggi-do 14585, Korea.
Gye-Woong KimDepartment of Animal Resources Science, College of Industrial Sciences, Kongju National University, Yesan-eup, Yesan-gun, Chungcheongnam-do 32588, Korea.
Jae Young YooViral Disease Research Division, Animal and Plant Quarantine Agency, Ministry of Agriculture, Food and Rural Affairs, Gimcheon-si, Gyeongsangbuk-do 39660, Korea.ORCID 0000-0001-7119-5421

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carcass quality traits, such as lean depth and loin depth, are of extreme economic importance for the swine industry. This study aimed to identify the gene expression pattern related to carcass quality in crossbred pigs ((Landrace × Yorkshire) × Duroc). In total, 20 crossbred pigs were used in this study and they were divided into two groups (class I grade, n = 10; class II grade, n = 10) based on the carcass grades. Total RNA samples extracted from the loin muscles of both groups were submitted for RNA-seq. The quality assessment of the sequencing reads resulted in 25,458 unigenes and found 12,795 candidate coding unigenes with homology to other species after annotation. Differentially expressed gene (DEG) analysis of the two groups revealed 282 up-regulated and 189 down-regulated genes (

Indexed as

apelin signaling pathwaydifferentially expressed genesmeat qualityRNA sequencingZ-disc

Identifiers

PMID32727063
PMCPMC7569835

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.