Evidence map›Paper›PMID 32726795›Full record

ArticleNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2020

Synaptic control of DNA methylation involves activity-dependent degradation of DNMT3A1 in the nucleus.

Gonca Bayraktar, PingAn Yuanxiang, Alessandro D Confettura, Guilherme M Gomes, Syed A Raza, Oliver Stork, Shoji Tajima, Isao Suetake, Anna Karpova, Ferah Yildirim and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. DNA Methylation in Long-Term Memory.Physiology (Bethesda, Md.) · 2025
    Review
  6. Review
  7. Dnmt3a1 regulates hippocampus-dependent memory via the downstream target Nrp1.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Article
  8. Epigenetic modifications of DNA and RNA in Alzheimer's disease.Frontiers in molecular neuroscience · 2024
    Review
  9. Article
  10. Article
  11. Role of DNMTs in the Brain.Advances in experimental medicine and biology · 2022
    Review
  12. Article
  13. Article
  14. Roles of N-Methyl-D-Aspartate Receptors (NMDARs) in Epilepsy.Frontiers in molecular neuroscience · 2021
    Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 3 countries.

Gonca BayraktarRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany.ORCID http://orcid.org/0000-0001-5476-4346
PingAn YuanxiangRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany.ORCID http://orcid.org/0000-0002-3746-3282
Alessandro D ConfetturaRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany.
Guilherme M GomesRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany.ORCID http://orcid.org/0000-0001-8566-4284
Syed A RazaDepartment of Genetics and Molecular Neurobiology, Institute of Biology, Otto-von-Guericke University, Leipziger Str. 44, Haus 91, 39120, Magdeburg, Germany.
Oliver StorkCenter for Behavioral Brain Sciences, Otto von Guericke University, 39120, Magdeburg, Germany.
Shoji TajimaInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, 565-0871, Osaka, Japan.
Isao SuetakeDepartment of Nutritional Sciences, Faculty of Nutritional Sciences, Nakamura Gakuen University, Fukuoka, Japan.ORCID http://orcid.org/0000-0002-1246-8474
Anna KarpovaRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany.
Ferah YildirimNeuroCure Clinical Research Center & Department of Neuropsychiatry at Department of Psychiatry and Psychotherapy, Charité-Universitätsmedizin Berlin, Virchowweg 6, Charitéplatz 1, 10117, Berlin, Germany.
Michael R KreutzRG Neuroplasticity, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118, Magdeburg, Germany. Kreutz@lin-magdeburg.de.ORCID http://orcid.org/0000-0003-0575-6950
Center for Behavioral Brain Sciences · DELeibniz Institute for Neurobiology · DECharité - Universitätsmedizin Berlin · DEGerman Center for Neurodegenerative Diseases · DEOtto-von-Guericke-Universität Magdeburg · DEProtein Research Foundation · JPThe University of Osaka · JPUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation is a crucial epigenetic mark for activity-dependent gene expression in neurons. Very little is known about how synaptic signals impact promoter methylation in neuronal nuclei. In this study we show that protein levels of the principal de novo DNA-methyltransferase in neurons, DNMT3A1, are tightly controlled by activation of N-methyl-D-aspartate receptors (NMDAR) containing the GluN2A subunit. Interestingly, synaptic NMDARs drive degradation of the methyltransferase in a neddylation-dependent manner. Inhibition of neddylation, the conjugation of the small ubiquitin-like protein NEDD8 to lysine residues, interrupts degradation of DNMT3A1. This results in deficits in promoter methylation of activity-dependent genes, as well as synaptic plasticity and memory formation. In turn, the underlying molecular pathway is triggered by the induction of synaptic plasticity and in response to object location learning. Collectively, the data show that plasticity-relevant signals from GluN2A-containing NMDARs control activity-dependent DNA-methylation involved in memory formation.

Indexed as

DNA MethylationSynapsesMemoryNeuronal PlasticityNeuronsReceptors, N-Methyl-D-AspartateReceptors, N-Methyl-D-Aspartate

Identifiers

PMID32726795
PMCPMC7547096
OpenAlexW3046006086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.