Evidence map›Paper›PMID 32726614›Full record

ArticleCell reports2020

Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA.

Joel D Federspiel, Katelyn C Cook, Michelle A Kennedy, Samvida S Venkatesh, Clayton J Otter, William A Hofstadter, Pierre M Jean Beltran, Ileana M Cristea

Abstract read
In one paragraph

Article in Cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  16. Subcellular proteomics.Nature reviews. Methods primers · 2021
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Joel D FederspielDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Katelyn C CookDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Michelle A KennedyDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Samvida S VenkateshDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Clayton J OtterDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
William A HofstadterDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Pierre M Jean BeltranDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA.
Ileana M CristeaDepartment of Molecular Biology, Princeton University, Washington Road, Princeton, NJ 08544, USA. Electronic address: icristea@princeton.edu.

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Mechanisms mediating immune response upon sensing of nuclear viral DNAR01GM114141 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 2015 to 2023
$2.6M
Dynamic organelle membrane contacts as key regulators of virus replicationF31AI147637 · NIAID · PRINCETON UNIVERSITY · PI COOK, KATELYN CAMILLE · 2019 to 2021
$137k
NIAID NIH HHS F31 AI147637NIGMS NIH HHS R01 GM114141NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

Nearly all biological processes rely on the finely tuned coordination of protein interactions across cellular space and time. Accordingly, generating protein interactomes has become routine in biological studies, yet interpreting these datasets remains computationally challenging. Here, we introduce Inter-ViSTA (Interaction Visualization in Space and Time Analysis), a web-based platform that quickly builds animated protein interaction networks and automatically synthesizes information on protein abundances, functions, complexes, and subcellular localizations. Using Inter-ViSTA with proteomics and molecular virology, we define virus-host interactions for the human cytomegalovirus (HCMV) anti-apoptotic protein, pUL37x1. We find that spatiotemporal controlled interactions underlie pUL37x1 functions, facilitating the pro-viral remodeling of mitochondria and peroxisomes during infection. Reciprocal isolations, microscopy, and genetic manipulations further characterize these associations, revealing the interplay between pUL37x1 and the MIB complex, which is critical for mitochondrial integrity. At the peroxisome, we show that pUL37x1 activates PEX11β to regulate fission, a key aspect of virus assembly and spread.

Indexed as

Cell LineComputational BiologyCytomegalovirusCytomegalovirus InfectionsEndoplasmic ReticulumFibroblastsHost Microbial InteractionsHumansImmediate-Early ProteinsMitochondriaMitochondrial MembranesPeroxisomesProtein Interaction MapsImmediate-Early ProteinsHCMVInter-ViSTAIP-MSMICOSmitochondriaperoxisomeprotein interactionspUL37virus-host interactionsvMIA

Identifiers

PMID32726614
PMCPMC8489195

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.