Evidence map›Paper›PMID 32726586›Full record

ReviewCell chemical biology2020

Strategies for Tuning the Selectivity of Chemical Probes that Target Serine Hydrolases.

Franco Faucher, John M Bennett, Matthew Bogyo, Scott Lovell

Abstract readReview
In one paragraph

Review in Cell chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Review
  2. Recent Advances in Fluorescent Probes for Imaging Enzyme Activity in NETosis.Chembiochem : a European journal of chemical biology · 2026
    Review
  3. Review
  4. Article
  5. Unique structural and ligand-binding properties of theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Unique structural and ligand binding properties of thebioRxiv : the preprint server for biology · 2025
    Article
  8. Synthesis and evaluation ofSynlett : accounts and rapid communications in synthetic organic chemistry · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. An mRNA Display Approach for Covalent Targeting of aJournal of the American Chemical Society · 2025
    Article
  15. Synthesis and Application of Activity-Based Probes for Serine Proteases.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  16. Article
  17. Diversity Oriented Clicking for Modular Synthesis.Nature reviews. Methods primers · 2025
    Article
  18. Article
  19. An mRNA Display Approach for Covalent Targeting of abioRxiv : the preprint server for biology · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Franco FaucherDepartment of Chemistry, Stanford University, Stanford, CA 94305, USA.
John M BennettDepartment of Chemistry, Stanford University, Stanford, CA 94305, USA.
Matthew BogyoDepartment of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: mbogyo@stanford.edu.
Scott LovellDepartment of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: slovell@stanford.edu.

Funding

Dual orthogonal fluorescent protease sensors for image guided surgeryR01EB028628 · NIBIB · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2019 to 2023
$1.9M
NIBIB NIH HHS R01 EB028628
6 · The paper itself

Abstract

Serine hydrolases comprise a large family of enzymes that have diverse roles in key cellular processes, such as lipid metabolism, cell signaling, and regulation of post-translation modifications of proteins. They are also therapeutic targets for multiple human pathologies, including viral infection, diabetes, hypertension, and Alzheimer disease; however, few have well-defined substrates and biological functions. Activity-based probes (ABPs) have been used as effective tools to both profile activity and screen for selective inhibitors of serine hydrolases. One broad-spectrum ABP containing a fluorophosphonate electrophile has been used extensively to advance our understanding of diverse serine hydrolases. Due to the success of this single reagent, several robust chemistries have been developed to further diversify and tune the selectivity of ABPs used to target serine hydrolases. In this review, we highlight approaches to identify selective serine hydrolase ABPs and suggest new synthetic methodologies that could be applied to further advance probe development.

Indexed as

Click ChemistryFluorescent DyesOrganophosphonatesPeptidesProteomicsRhodaminesSerine ProteasesSmall Molecule LibrariesFluorescent DyesOrganophosphonatesPeptidesRhodaminesSerine ProteasesSmall Molecule Librariesactivity-based probeactivity-based protein profilingcovalent bindersproteaseserine hydrolase

Identifiers

PMID32726586
PMCPMC7484133

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.