Evidence map›Paper›PMID 32725306›Full record

Observational studyWorld journal of urology2021

Renal pelvis urine Gram stain as a traditional, but new marker in predicting postoperative fever and stone culture positivity in percutaneous nephrolithotomy: an observational, prospective, non-randomized cohort study.

Nejdet Karsiyakali, Ugur Yucetas, Aysel Karatas, Emre Karabay, Emrah Okucu, Erkan Erkan

Abstract readObservational Study
PubMed Publisher
In one paragraph

Observational study in World journal of urology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 3 pooled it
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 3 syntheses or guidelines pooled it, 61 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Nejdet KarsiyakaliDepartment of Urology, Acibadem M.A. Aydinlar University, Altunizade Hospital, Istanbul, Turkey. nkarsiyakali@hotmail.com.ORCID http://orcid.org/0000-0002-0709-0331
Ugur YucetasDepartment of Urology, University of Health Sciences, Istanbul Training and Research Hospital, Istanbul, Turkey.
Aysel KaratasDepartment of Clinical Microbiology Laboratory, University of Health Sciences, Istanbul Training and Research Hospital, Istanbul, Turkey.
Emre KarabayDepartment of Urology, University of Health Sciences, Haydarpasa Numune Training and Research Hospital, Istanbul, Turkey.
Emrah OkucuDepartment of Urology, University of Health Sciences, Istanbul Training and Research Hospital, Istanbul, Turkey.
Erkan ErkanDepartment of Urology, University of Health Sciences, Istanbul Training and Research Hospital, Istanbul, Turkey.
Sağlık Bilimleri Üniversitesi · TRAcıbadem University · TRHaydarpaşa Numune Eğitim ve Araştırma Hastanesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe aim of this study was to evaluate the diagnostic value of renal pelvis urine Gram staining (RPUGS) in predicting postoperative fever and renal stone culture (RSC) positivity in percutaneous nephrolithotomy (PCNL).

methodsTotally 141 consecutive patients undergoing PCNL for renal stone were included between January 2018 and December 2019. The RPUGS and renal pelvis urine culture (RPUC) were performed using urine sample from renal collecting system, while RSC was performed using stone fragments. Patients were divided into two groups as Group 1 (n = 119) without postoperative fever (< 38 °C) and Group 2 (n = 22) with postoperative fever (≥ 38 °C). Stone culture and Gram staining models were created for predicting postoperative fever using constant covariates of the presence of residual stone, hydronephrosis, and stone burden.

resultsA significantly higher number of patients in Group 2 had RPUGS, RSC, and RPUC positivity (p < 0.001, for each). The sensitivity, specificity, positive predictive value, and negative predictive value of RPUGS in predicting postoperative fever were 72.7%, 89.9%, 57.1%, and 94.7%, respectively. It was observed that both models had similar predictive values and diagnostic performances. Although RSC and RPUGS had a similar diagnostic value in predicting postoperative fever in univariable analysis, both were found to be independent predictors in multivariable analysis (OR: 10.6, 95% CI 4.07-27.9, p < 0.001 and OR: 15.0, 95% CI 5.4-41.2, p < 0.001, respectively).

conclusionsIn conclusion, RPUGS is as effective as RSC in predicting fever after PCNL. We recommend RPUGS during PCNL to manage post-PCNL infectious complications.

Indexed as

Kidney PelvisNephrolithotomy, PercutaneousAdultCohort StudiesFemaleFeverGentian VioletHumansKidney CalculiMaleMiddle AgedPhenazinesPostoperative ComplicationsPredictive Value of TestsProspective StudiesUrinary Tract InfectionsGentian VioletGram's stainPhenazinesComplicationsGram stainInfectionsNephrolithiasisPercutaneous nephrolithotomyStone culture

Identifiers

PMID32725306
OpenAlexW3046023072

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.