Evidence map›Paper›PMID 32724172›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2020

Pathogenic mosaic variants in congenital hypogonadotropic hypogonadism.

James S Acierno, Cheng Xu, Georgios E Papadakis, Nicolas J Niederländer, Jesse D Rademaker, Jenny Meylan, Andrea Messina, Zofia Kolesinska, Richard Quinton, Mariarosaria Lang-Muritano and 8 more

Open access · bronzeAbstract read
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In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 10 institutions in 5 countries.

James S AciernoService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Cheng XuService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Georgios E PapadakisService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Nicolas J NiederländerService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Jesse D RademakerService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Jenny MeylanService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Andrea MessinaService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Zofia KolesinskaService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Richard QuintonTranslational & Clinical Research Institute, University of Newcastle-upon-Tyne, Newcastle-upon-Tyne, UK.
Mariarosaria Lang-MuritanoDivision of Pediatric Endocrinology and Diabetology and Children's Research Centre, University Children's Hospital, Zurich, Switzerland.
Deborah BartholdiDepartment of Human Genetics, Inselspital, Bern University Hospital and University of Bern, Bern, Switzerland.
Irene HalperinDepartment of Endocrinology, Hospital Clínic, Universitat de Barcelona, Barcelona, Spain.
Christian De GeyterReproductive Medicine and Gynecological Endocrinology (RME), University Hospital, University of Basel, Basel, Switzerland.
Jérôme BouligandDepartment of Molecular Genetics, Pharmacogenomics, and Hormonology, Assistance Publique-Hôpitaux de Paris, Hôpital Bicêtre, Le Kremlin-Bicêtre, France.
Lucia BartoloniService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Jacques YoungDepartment of Reproductive Endocrinology, Assistance Publique-Hôpitaux de Paris, Bicêtre Hôpital, Le Kremlin-Bicêtre, France.
Federico A SantoniService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland.
Nelly PitteloudService of Endocrinology, Diabetology and Metabolism, Lausanne University Hospital, Lausanne, Switzerland. nelly.pitteloud@chuv.ch.ORCID http://orcid.org/0000-0003-0971-3237
University of Lausanne · CHInserm · FRAssistance Publique – Hôpitaux de Paris · FRNewcastle University · GBPoznan University of Medical Sciences · PLUniversitat de Barcelona · ESUniversity Children's Hospital Zurich · CHUniversity Hospital of Lausanne · CHUniversity of Basel · CHUniversity of Bern · CH

Funding

Swiss National Science Foundation 310030_173260
6 · The paper itself

Abstract

purposeCongenital hypogonadotropic hypogonadism (CHH) is a rare disorder resulting in absent puberty and infertility. The genetic architecture is complex with multiple loci involved, variable expressivity, and incomplete penetrance. The majority of cases are sporadic, consistent with a disease affecting fertility. The current study aims to investigate mosaicism as a genetic mechanism for CHH, focusing on de novo rare variants in CHH genes.

methodsWe evaluated 60 trios for de novo rare sequencing variants (RSV) in known CHH genes using exome sequencing. Potential mosaicism was suspected among RSVs with altered allelic ratios and confirmed using customized ultradeep sequencing (UDS) in multiple tissues.

resultsAmong the 60 trios, 10 probands harbored de novo pathogenic variants in CHH genes. Custom UDS demonstrated that three of these de novo variants were in fact postzygotic mosaicism-two in FGFR1 (p.Leu630Pro and p.Gly348Arg), and one in CHD7 (p.Arg2428*). Statistically significant variation across multiple tissues (DNA from blood, buccal, hair follicle, urine) confirmed their mosaic nature.

conclusionsWe identified a significant number of de novo pathogenic variants in CHH of which a notable number (3/10) exhibited mosaicism. This report of postzygotic mosaicism in CHH patients provides valuable information for accurate genetic counseling.

Indexed as

HypogonadismInfertilityExome SequencingGenetic CounselingHumansMosaicismCHD7copy-number variationFGFR1hypogonadotropic hypogonadismpostzygotic mosaicism

Identifiers

PMID32724172
OpenAlexW3046034227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.