Evidence map›Paper›PMID 32724082›Full record

ArticleScientific reports2020

Single-cell mass cytometry on peripheral blood identifies immune cell subsets associated with primary biliary cholangitis.

Jin Sung Jang, Brian D Juran, Kevin Y Cunningham, Vinod K Gupta, Young Min Son, Ju Dong Yang, Ahmad H Ali, Elizabeth Ann L Enninga, Jaeyun Sung, Konstantinos N Lazaridis

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Machine Learning Predicts Treatment Response and Prognostic Pathways From Whole-Blood Transcriptome in Primary Biliary Cholangitis.Liver international : official journal of the International Association for the Study of the Liver · 2026
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  16. Data processing workflow for large-scale immune monitoring studies by mass cytometry.Computational and structural biotechnology journal · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jin Sung JangMedical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Brian D JuranDivision of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
Kevin Y CunninghamGraduate Research Education Program (GREP), Mayo Clinic, Rochester, MN, USA.
Vinod K GuptaMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Young Min SonDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Mayo Clinic, Rochester, MN, USA.
Ju Dong YangDivision of Digestive and Liver Diseases, Department of Medicine, Cedars Sinai Medical Center, Los Angeles, CA, USA.
Ahmad H AliDivision of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
Elizabeth Ann L EnningaDepartment of Immunology, Mayo Clinic, Rochester, MN, USA.
Jaeyun SungMicrobiome Program, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA. Sung.Jaeyun@mayo.edu.
Konstantinos N LazaridisDivision of Gastroenterology and Hepatology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA. Lazaridis.Konstantinos@mayo.edu.
Mayo Clinic · USMayo Clinic in Arizona · USCedars-Sinai Medical Center · USTwin Cities Orthopedics · US

Funding

Mayo Clinic Interdisciplinary Women's Health Research ProgramK12HD065987 · NICHD · MAYO CLINIC ROCHESTER · PI KANTARCI, KEJAL · 2010 to 2023
$6.7M
NICHD NIH HHS K12 HD065987NIH HHS K12 HD065987
6 · The paper itself

Abstract

The relationship between primary biliary cholangitis (PBC), a chronic cholestatic autoimmune liver disease, and the peripheral immune system remains to be fully understood. Herein, we performed the first mass cytometry (CyTOF)-based, immunophenotyping analysis of the peripheral immune system in PBC at single-cell resolution. CyTOF was performed on peripheral blood mononuclear cells (PBMCs) from PBC patients (n = 33) and age-/sex-matched healthy controls (n = 33) to obtain immune cell abundance and marker expression profiles. Hierarchical clustering methods were applied to identify immune cell types and subsets significantly associated with PBC. Subsets of gamma-delta T cells (CD3

Indexed as

AdultCase-Control StudiesFemaleFlow CytometryHumansLiver Cirrhosis, BiliaryMaleMiddle AgedSingle-Cell Analysis

Identifiers

PMID32724082
PMCPMC7387528
OpenAlexW3045928386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.