Evidence map›Paper›PMID 32723824›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Haplotype networks of SARS-CoV-2 infections in the

Tsuyoshi Sekizuka, Kentaro Itokawa, Tsutomu Kageyama, Shinji Saito, Ikuyo Takayama, Hideki Asanuma, Naganori Nao, Rina Tanaka, Masanori Hashino, Takuri Takahashi and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 2 pooled it
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 2 syntheses or guidelines pooled it, 84 citations in OpenAlex.

  1. Pooled it
  2. Systematic Review on Outbreaks of SARS-CoV-2 on Cruise, Navy and Cargo Ships.International journal of environmental research and public health · 2021
    Pooled it
  3. Article
  4. Article
  5. Estimating epidemic dynamics with genomic and time series data.Journal of the Royal Society, Interface · 2025
    Article
  6. Article
  7. Methodology of Epidemic Risk Analysis in the Naval Military.International journal of environmental research and public health · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. COVID-19 outbreaks among crew on commercial ships at the Port of Rotterdam, the Netherlands, 2020 to 2021.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Pro108Ser mutation of SARS-CoV-2 3CLScientific reports · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Tsuyoshi SekizukaPathogen Genomics Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.ORCID 0000-0002-1302-5472
Kentaro ItokawaPathogen Genomics Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Tsutomu KageyamaInfluenza Virus Research Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Shinji SaitoInfluenza Virus Research Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Ikuyo TakayamaInfluenza Virus Research Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Hideki AsanumaInfluenza Virus Research Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Naganori NaoDepartment of Virology 3, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Rina TanakaPathogen Genomics Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Masanori HashinoPathogen Genomics Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Takuri TakahashiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.ORCID 0000-0002-2482-7286
Hajime KamiyaInfectious Disease Surveillance Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Takuya YamagishiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.ORCID 0000-0002-9566-201X
Kensaku KakimotoInfectious Disease Surveillance Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.ORCID 0000-0002-0592-3280
Motoi SuzukiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Hideki HasegawaInfluenza Virus Research Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Takaji WakitaNational Institute of Infectious Diseases, 162-8640 Tokyo, Japan.
Makoto KurodaPathogen Genomics Center, National Institute of Infectious Diseases, 162-8640 Tokyo, Japan; makokuro@niid.go.jp.
National Institute of Infectious Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The

Indexed as

Genome, ViralHaplotypesPhylogenyShipsBetacoronavirusCoronavirus InfectionsCOVID-19HumansPandemicsPneumonia, ViralQuarantineSARS-CoV-2Whole Genome SequencingCOVID-19Diamond PrincesshaplotypesSARS-CoV-2

Identifiers

PMID32723824
PMCPMC7443927
OpenAlexW3046101065

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.