Evidence map›Paper›PMID 32722098›Full record

ArticleGenes2020

Sequencing and Analysis of the Sex Determination Region of

Ran Zhou, David Macaya-Sanz, Jeremy Schmutz, Jerry W Jenkins, Gerald A Tuskan, Stephen P DiFazio

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. ARR17 controls dioecy inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Genome and Transcriptome Sequencing ofFrontiers in genetics · 2021
    Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ran ZhouDepartment of Biology, West Virginia University, Morgantown, WV 26506-6057, USA.
David Macaya-SanzDepartment of Biology, West Virginia University, Morgantown, WV 26506-6057, USA.
Jeremy SchmutzHudsonAlpha Institute of Biotechnology, 601 Genome Way Northwest, Huntsville, AL 35806, USA.ORCID 0000-0001-8062-9172
Jerry W JenkinsHudsonAlpha Institute of Biotechnology, 601 Genome Way Northwest, Huntsville, AL 35806, USA.
Gerald A TuskanDepartment of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA.
Stephen P DiFazioDepartment of Biology, West Virginia University, Morgantown, WV 26506-6057, USA.ORCID 0000-0003-4077-1590
West Virginia University · USJoint Genome Institute · USHudsonAlpha Institute for Biotechnology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ages and sizes of a sex-determination region (SDR) are difficult to determine in non-model species. Due to the lack of recombination and enrichment of repetitive elements in SDRs, the quality of assembly with short sequencing reads is universally low. Unique features present in the SDRs help provide clues about how SDRs are established and how they evolve in the absence of recombination. Several

Indexed as

Biological EvolutionGenome, PlantSex ChromosomesSex Determination ProcessesChromosomes, PlantDNA, PlantPopulusDNA, Plantcytokinin response regulatorgenomeinverted repeatsPopulussex

Identifiers

PMID32722098
PMCPMC7465354
OpenAlexW3045223128

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.