Evidence map›Paper›PMID 32719792›Full record

ArticleFrontiers in cell and developmental biology2020

The Transcriptional Network That Controls Growth Arrest and Macrophage Differentiation in the Human Myeloid Leukemia Cell Line THP-1.

Iveta Gažová, Lucas Lefevre, Stephen J Bush, Sara Clohisey, Erik Arner, Michiel de Hoon, Jessica Severin, Lucas van Duin, Robin Andersson, Andreas Lengeling and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

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  11. Elf1 Deficiency Impairs Macrophage Development in Zebrafish Model Organism.International journal of molecular sciences · 2025
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  16. Human CD34Cellular and molecular life sciences : CMLS · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 5 countries.

Iveta GažováThe Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom.
Lucas LefevreThe Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom.
Stephen J BushThe Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom.
Sara ClohiseyThe Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom.
Erik ArnerRIKEN Center for Integrative Medical Sciences, Kanagawa, Yokohama, Japan.
Michiel de HoonRIKEN Center for Integrative Medical Sciences, Kanagawa, Yokohama, Japan.
Jessica SeverinRIKEN Center for Integrative Medical Sciences, Kanagawa, Yokohama, Japan.
Lucas van DuinBioinformatics Centre, University of Copenhagen, Copenhagen, Denmark.
Robin AnderssonBioinformatics Centre, University of Copenhagen, Copenhagen, Denmark.
Andreas LengelingMax Planck Society - Administrative Headquarters, Munich, Germany.
David A HumeMater Research Institute - University of Queensland, Translational Research Institute, Brisbane, QLD, Australia.
Kim M SummersThe Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom.
RIKEN Center for Integrative Medical Sciences · JPUniversity of Edinburgh · GBRoslin Institute · GBUniversity of Copenhagen · DKMax Planck Innovation · DEUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The response of the human acute myeloid leukemia cell line THP-1 to phorbol esters has been widely studied to test candidate leukemia therapies and as a model of cell cycle arrest and monocyte-macrophage differentiation. Here we have employed Cap Analysis of Gene Expression (CAGE) to analyze a dense time course of transcriptional regulation in THP-1 cells treated with phorbol myristate acetate (PMA) over 96 h. PMA treatment greatly reduced the numbers of cells entering S phase and also blocked cells exiting G2/M. The PMA-treated cells became adherent and expression of mature macrophage-specific genes increased progressively over the duration of the time course. Within 1-2 h PMA induced known targets of tumor protein p53 (TP53), notably

Indexed as

cell cycledifferentiationmacrophagemonocytep53THP-1 cellstranscriptome

Identifiers

PMID32719792
PMCPMC7347797
OpenAlexW3040552502

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.