Evidence map›Paper›PMID 32719520›Full record

ArticleNature immunology2020

The transcription factor BCL-6 controls early development of innate-like T cells.

Marianthi Gioulbasani, Alexandros Galaras, Sofia Grammenoudi, Panagiotis Moulos, Alexander L Dent, Mikael Sigvardsson, Pantelis Hatzis, Barbara L Kee, Mihalis Verykokakis

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  4. B Cell Lymphoma 6 (BCL6): A Conserved Regulator of Immunity and Beyond.International journal of molecular sciences · 2024
    Review
  5. Key Functions of the Transcription Factor BCL6 During T-Cell Differentiation.Advances in experimental medicine and biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Marianthi Gioulbasani *Institute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece.
Alexandros Galaras *Institute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece.
Sofia GrammenoudiInstitute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece.
Panagiotis MoulosInstitute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece.
Alexander L DentDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, IN, USA.
Mikael SigvardssonDepartment of Clinical and Experimental Medicine, Experimental Hematopoiesis Unit, Faculty for Health Sciences, Linköping University, Linköping, Sweden.
Pantelis HatzisInstitute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece.
Barbara L KeeDepartment of Pathology and Committee on Immunology, University of Chicago, Chicago, IL, USA. bkee@bsd.uchicago.edu.ORCID http://orcid.org/0000-0001-7014-1982
Mihalis VerykokakisInstitute for Fundamental Biomedical Research, BSRC Alexander Fleming, Vari, Greece. verykokakis@fleming.gr.ORCID http://orcid.org/0000-0002-2780-5007
Alexander Fleming Biomedical Sciences Research Center · GRIndiana University School of MedicineLinköping University · SEUniversity of Chicago · USUniversity of Thessaly · GR

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI MARK W. LINGEN · 1985 to 2026
$122.1M
Mechanisms of E protein transcription factor-dependent iNKT cell expansion and differentiationR01AI123396 · NIAID · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2017 to 2021
$2.0M
E and Id protein function in natural killer T cell differentiationR56AI104303 · NIAID · UNIVERSITY OF CHICAGO · PI KEE, BARBARA L. · 2013 to 2013
$366k
NCI NIH HHS P30 CA014599NIAID NIH HHS R01 AI123396NIAID NIH HHS R56 AI104303
6 · The paper itself

Abstract

Innate T cells, including invariant natural killer T (iNKT) and mucosal-associated innate T (MAIT) cells, are a heterogeneous T lymphocyte population with effector properties preprogrammed during their thymic differentiation. How this program is initiated is currently unclear. Here, we show that the transcription factor BCL-6 was transiently expressed in iNKT cells upon exit from positive selection and was required for their proper development beyond stage 0. Notably, development of MAIT cells was also impaired in the absence of Bcl6. BCL-6-deficient iNKT cells had reduced expression of genes that were associated with the innate T cell lineage, including Zbtb16, which encodes PLZF, and PLZF-targeted genes. BCL-6 contributed to a chromatin accessibility landscape that was permissive for the expression of development-related genes and inhibitory for genes associated with naive T cell programs. Our results revealed new functions for BCL-6 and illuminated how this transcription factor controls early iNKT cell development.

Indexed as

AnimalsCell DifferentiationCells, CulturedChromatinClonal Selection, Antigen-MediatedGene Expression Regulation, DevelopmentalImmunity, InnateLymphocyte ActivationMiceMice, Inbred C57BLMice, KnockoutMucosal-Associated Invariant T CellsNatural Killer T-CellsPromyelocytic Leukemia Zinc Finger ProteinProto-Oncogene Proteins c-bcl-6ChromatinPromyelocytic Leukemia Zinc Finger ProteinProto-Oncogene Proteins c-bcl-6

Identifiers

PMID32719520
PMCPMC7442690
OpenAlexW3044818485

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.