Evidence map›Paper›PMID 32719507›Full record

ArticleNature microbiology2020

Epigenetic cell fate in Candida albicans is controlled by transcription factor condensates acting at super-enhancer-like elements.

Corey Frazer, Mae I Staples, Yoori Kim, Matthew Hirakawa, Maureen A Dowell, Nicole V Johnson, Aaron D Hernday, Veronica H Ryan, Nicolas L Fawzi, Ilya J Finkelstein and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Fusion protein condensate formation via coiled-coil domains.Protein science : a publication of the Protein Society · 2026
    Article
  4. Article
  5. Article
  6. Review
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  10. Article
  11. Article
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  13. Article
  14. Article
  15. Article
  16. Review
  17. The Heat Shock Response as a Condensate Cascade.Journal of molecular biology · 2024
    Review
  18. White-opaque switching inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  19. Fighting Emerging Caspofungin-ResistantAntibiotics (Basel, Switzerland) · 2024
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Corey Frazer *Department of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA.
Mae I Staples *Department of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA.
Yoori KimDepartment of Molecular Biosciences and Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.
Matthew HirakawaDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA.
Maureen A DowellDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA.ORCID http://orcid.org/0000-0001-6492-899X
Nicole V JohnsonDepartment of Molecular Biosciences and Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.
Aaron D HerndayDepartment of Molecular and Cell Biology, University of California Merced, Merced, CA, USA.
Veronica H RyanNeuroscience Graduate Program, Brown University, Providence, RI, USA.ORCID http://orcid.org/0000-0001-5121-4672
Nicolas L FawziDepartment of Molecular Pharmacology, Physiology and Biotechnology, Brown University, Providence, RI, USA.ORCID http://orcid.org/0000-0001-5483-0577
Ilya J FinkelsteinDepartment of Molecular Biosciences and Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.ORCID http://orcid.org/0000-0002-9371-2431
Richard J BennettDepartment of Molecular Microbiology and Immunology, Brown University, Providence, RI, USA. Richard_Bennett@brown.edu.ORCID http://orcid.org/0000-0001-7563-484X
Brown University · USThe University of Texas at Austin · USUniversity of California, Merced · US

Funding

Interdisciplinary Predoctoral Neuroscience Training Program in the Neuroscience Graduate Program.T32MH020068 · NIMH · BROWN UNIVERSITY · PI LIPSCOMBE, DIANE, SHEINBERG, DAVID L · 1999 to 2025
$7.6M
Transcriptional Regulation of C. albicans Cell Fate and Host InteractionsR01AI081704 · NIAID · BROWN UNIVERSITY · PI Richard John Bennett · 2010 to 2026
$6.4M
Brown Respiratory Research Training ProgramT32HL134625 · NHLBI · BROWN UNIVERSITY · PI Elizabeth O Harrington, Sharon Irene Smith Rounds · 2017 to 2026
$5.1M
Genetic Regulation of Heritable Switching in Candida albicansR01AI141893 · NIAID · BROWN UNIVERSITY · PI BENNETT, RICHARD JOHN · 2019 to 2023
$2.7M
Short-Term Training Program to Increase Diversity in Health-Related ResearchR25HL088992 · NHLBI · BROWN UNIVERSITY · PI ABID, RUHUL, DIAZ, JOSEPH A · 2007 to 2024
$1.9M
Turning off the molecular switch for pathological self-assembly of FUSR01GM118530 · NIGMS · BROWN UNIVERSITY · PI FAWZI, NICOLAS LUX · 2016 to 2020
$1.6M
Mechanistic Characterization of the First Steps of Human DNA Break RepairR01GM120554 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI FINKELSTEIN, ILYA J · 2016 to 2020
$1.5M
Defining the Role of Prion-Like Domains in a C. albicans Transcription Factor NetworkR21AI135228 · NIAID · BROWN UNIVERSITY · PI BENNETT, RICHARD JOHN · 2018 to 2019
$447k
Development of a high-throughput assay for Candida albicans cell-type switchingR15AI137975 · NIAID · UNIVERSITY OF CALIFORNIA, MERCED · PI HERNDAY, AARON D · 2019 to 2019
$444k
Effect of neurodegenerative disease mutations and post-translational modifications on hnRNPA2 structure, function, and interactions in phase-separated ribonucleoprotein granulesF31NS110301 · NINDS · BROWN UNIVERSITY · PI RYAN, VERONICA HANLEY · 2018 to 2019
$87k
Transcriptional regulation of C. albicans biofilms by formation of phase-separated condensatesF31DE029680 · NIDCR · BROWN UNIVERSITY · PI STAPLES, MAE · 2020 to 2021
$83k
Howard Hughes Medical InstituteNHLBI NIH HHS R25 HL088992NHLBI NIH HHS T32 HL134625NIAID NIH HHS R01 AI081704NIAID NIH HHS R01 AI141893NIAID NIH HHS R15 AI137975NIAID NIH HHS R21 AI135228NIDCR NIH HHS F31 DE029680NIGMS NIH HHS R01 GM118530NIGMS NIH HHS R01 GM120554NIMH NIH HHS T32 MH020068NINDS NIH HHS F31 NS110301
6 · The paper itself

Abstract

Cell identity in eukaryotes is controlled by transcriptional regulatory networks that define cell-type-specific gene expression. In the opportunistic fungal pathogen Candida albicans, transcriptional regulatory networks regulate epigenetic switching between two alternative cell states, 'white' and 'opaque', that exhibit distinct host interactions. In the present study, we reveal that the transcription factors (TFs) regulating cell identity contain prion-like domains (PrLDs) that enable liquid-liquid demixing and the formation of phase-separated condensates. Multiple white-opaque TFs can co-assemble into complex condensates as observed on single DNA molecules. Moreover, heterotypic interactions between PrLDs support the assembly of multifactorial condensates at a synthetic locus within live eukaryotic cells. Mutation of the Wor1 TF revealed that substitution of acidic residues in the PrLD blocked its ability to phase separate and co-recruit other TFs in live cells, as well as its function in C. albicans cell fate determination. Together, these studies reveal that PrLDs support the assembly of TF complexes that control fungal cell identity and highlight parallels with the 'super-enhancers' that regulate mammalian cell fate.

Indexed as

Enhancer Elements, GeneticEpigenesis, GeneticCandida albicansCell Line, TumorDNA, FungalFungal ProteinsGene Expression Regulation, FungalGene Regulatory NetworksHumansMutationPhenotypePrionsProtein AggregatesProtein DomainsTranscription FactorsDNA, FungalFungal ProteinsPrionsProtein AggregatesTranscription Factors

Identifiers

PMID32719507
PMCPMC7581547
OpenAlexW3044505383

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.