Evidence map›Paper›PMID 32719344›Full record

ArticleNature communications2020

Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.

Jelena Micic, Yu Li, Shan Wu, Daniel Wilson, Beril Tutuncuoglu, Ning Gao, John L Woolford

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. RiboScreenBiomedicines · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Jelena Micic *Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.
Yu Li *State Key Laboratory of Membrane Biology, School of Life Science, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-4844-3359
Shan WuState Key Laboratory of Membrane Biology, School of Life Science, Tsinghua University, Beijing, China.
Daniel WilsonDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.
Beril TutuncuogluDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-5458-2988
Ning GaoState Key Laboratory of Membrane Biology, Peking-Tsinghua Center for Life Sciences, School of Life Sciences, Peking University, Beijing, China. gaon@pku.edu.cn.ORCID http://orcid.org/0000-0003-3067-9993
John L WoolfordDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA. jw17@andrew.cmu.edu.ORCID http://orcid.org/0000-0002-7553-7043
Carnegie Mellon University · USPeking University · CNHubei University · CNUniversity of California, San Francisco · US

Funding

YEAST RIBOSOME BIOGENESISR01GM028301 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI WOOLFORD, JOHN L. · 1985 to 2025
$8.4M
NIGMS NIH HHS R01 GM028301
6 · The paper itself

Abstract

The protein composition and structure of assembling 60S ribosomal subunits undergo numerous changes as pre-ribosomes transition from the nucleolus to the nucleoplasm. This includes stable anchoring of the Rpf2 subcomplex containing 5S rRNA, rpL5, rpL11, Rpf2 and Rrs1, which initially docks onto the flexible domain V of rRNA at earlier stages of assembly. In this work, we tested the function of the C-terminal domain (CTD) of Rpf2 during these anchoring steps, by truncating this extension and assaying effects on middle stages of subunit maturation. The rpf2Δ255-344 mutation affects proper folding of rRNA helices H68-70 during anchoring of the Rpf2 subcomplex. In addition, several assembly factors (AFs) are absent from pre-ribosomes or in altered conformations. Consequently, major remodeling events fail to occur: rotation of the 5S RNP, maturation of the peptidyl transferase center (PTC) and the nascent polypeptide exit tunnel (NPET), and export of assembling subunits to the cytoplasm.

Indexed as

RotationActive Transport, Cell NucleusCell NucleusModels, MolecularMutant ProteinsMutationProtein DomainsProtein FoldingRibonucleoproteinsRibosome Subunits, LargeRNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsMutant ProteinsRibonucleoproteinsRNA-Binding ProteinsRPF2 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID32719344
PMCPMC7385084
OpenAlexW3044914877

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.