Evidence map›Paper›PMID 32716946›Full record

ArticlePloS one2020

Distribution of heavy metal resistance elements in Canadian Salmonella 4,[5],12:i:- populations and association with the monophasic genotypes and phenotype.

Clifford G Clark, Chrystal Landgraff, James Robertson, Frank Pollari, Stephen Parker, Celine Nadon, Victor P J Gannon, Roger Johnson, John Nash

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Localization of the origin of transfer for Salmonella genomic island 4 from Salmonella enterica serovar I 4,[5],12:i:.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  4. Article
  5. Spread ofAntibiotics (Basel, Switzerland) · 2023
    Article
  6. Review
  7. Frontiers in veterinary science · 2023
    Article
  8. Genomic Analysis of Two MDR Isolates ofAntibiotics (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. The Rising Burden of Salmonellosis Caused by MonophasicAntibiotics (Basel, Switzerland) · 2021
    Article
  12. Colistin Resistance in Monophasic Isolates ofFrontiers in microbiology · 2021
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Clifford G ClarkNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.ORCID 0000-0003-0566-1468
Chrystal LandgraffNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
James RobertsonDivision of Enteric Diseases, National Microbiology Laboratory, Public Health Agency of Canada, Guelph, Ontario, Canada.
Frank PollariFoodNet Canada, Public Health Agency of Canada, Guelph, Ontario, Canada.
Stephen ParkerFoodNet Canada, Public Health Agency of Canada, Guelph, Ontario, Canada.
Celine NadonNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Manitoba, Canada.
Victor P J GannonDivision of Enteric Diseases, National Microbiology Laboratory, Public Health Agency of Canada, Lethbridge, Canada.
Roger JohnsonDivision of Enteric Diseases, National Microbiology Laboratory, Public Health Agency of Canada, Guelph, Ontario, Canada.
John NashDivision of Enteric Diseases, National Microbiology Laboratory, Public Health Agency of Canada, Guelph, Ontario, Canada.ORCID 0000-0003-2925-8710
Public Health Agency of Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella 4,[5],12:i:- are monophasic S. Typhimurium variants incapable of producing the second-phase flagellar antigen. They have emerged since the mid-1990s to become one of the most prevalent Salmonella serotypes causing human disease world-wide. Multiple genetic events associated with different genetic elements can result in the monophasic phenotype. Several jurisdictions have reported the emergence of a Salmonella 4,[5],12:i:- clone with SGI-4 and a genetic element (MREL) encoding a mercury resistance operon and antibiotic resistance loci that disrupts the second phase antigen region near the iroB locus in the Salmonella genome. We have sequenced 810 human and animal Canadian Salmonella 4,[5],12:i:- isolates and determined that isolates with SGI-4 and the mercury resistance element (MREL; also known as RR1&RR2) constitute several global clades containing various proportions of Canadian, US, and European isolates. Detailed analysis of the data provides a clearer picture of how these heavy metal elements interact with bacteria within the Salmonella population to produce the monophasic phenotype. Insertion of the MREL near iroB is associated with several deletions and rearrangements of the adjacent flaAB hin region, which may be useful for defining human case clusters that could represent outbreaks. Plasmids carrying genes encoding silver, copper, mercury, and antimicrobial resistance appear to be derived from IS26 mediated acquisition of these genes from genomes carrying SGI-4 and the MREL. Animal isolates with the mercury and As/Cu/Ag resistance elements are strongly associated with porcine sources in Canada as has been shown previously for other jurisdictions. The data acquired in these investigations, as well as from the extensive literature on the subject, may aid source attribution in outbreaks of the organism and interventions to decrease the prevalence of this clone and reduce its impact on human disease.

Indexed as

AnimalsAntigens, BacterialBase SequenceCanadaGenetic VariationGenome, BacterialGenotypeHumansInterspersed Repetitive SequencesMetals, HeavyPhenotypePhylogenyPlasmidsSalmonella typhimuriumSwineSyntenyAntigens, BacterialMetals, Heavy

Identifiers

PMID32716946
PMCPMC7384650
OpenAlexW3045632094

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.