Evidence map›Paper›PMID 32715656›Full record

ArticleMolecular genetics & genomic medicine2020

Whole genome sequencing identifies a duplicated region encompassing Xq13.2q13.3 in a large Iranian family with intellectual disability.

Sepideh Mehvari, Farzaneh Larti, Hao Hu, Zohreh Fattahi, Maryam Beheshtian, Seyedeh Sedigheh Abedini, Sanaz Arzhangi, Hans-Hilger Ropers, Vera M Kalscheuer, Daniel Auld and 3 more

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Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

13 authors at 6 institutions in 5 countries.

Sepideh MehvariGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.
Farzaneh LartiGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.ORCID 0000-0002-0447-2625
Hao HuMax Planck Institute for Molecular Genetics, Berlin, Germany.
Zohreh FattahiGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.
Maryam BeheshtianGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.
Seyedeh Sedigheh AbediniGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.ORCID 0000-0003-2671-2295
Sanaz ArzhangiGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.
Hans-Hilger RopersMax Planck Institute for Molecular Genetics, Berlin, Germany.
Vera M KalscheuerMax Planck Institute for Molecular Genetics, Berlin, Germany.ORCID 0000-0001-6898-3259
Daniel AuldDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-9486-1105
Kimia KahriziGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.ORCID 0000-0002-6587-7706
Yasser RiazalhosseiniDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Hossein NajmabadiGenetics Research Center, University of Social Welfare and Rehabilitation Sciences, Tehran, Iran.ORCID 0000-0002-6084-7778
University of Social Welfare and Rehabilitation Sciences · IRIsfahan Fertility and Infertility Center · IRMcGill Genome Centre · CAGuangzhou Women and Children Medical Center · CNJohannes Gutenberg University Mainz · DEMax Planck Institute for Molecular Genetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe X chromosome has historically been one of the most thoroughly investigated chromosomes regarding intellectual disability (ID), whose etiology is attributed to many factors including copy number variations (CNVs). Duplications of the long arm of the X chromosome have been reported in patients with ID, short stature, facial anomalies, and in many cases hypoplastic genitalia and/or behavioral abnormalities.

methodsHere, we report on a large Iranian family with X-linked ID caused by a duplication on the X chromosome identified by whole genome sequencing in combination with linkage analysis.

resultsSeven affected males in different branches of the family presented with ID, short stature, seizures, facial anomalies, behavioral abnormalities (aggressiveness, self-injury, anxiety, impaired social interactions, and shyness), speech impairment, and micropenis. The duplication of the region Xq13.2q13.3, which is ~1.8 Mb in size, includes seven protein-coding OMIM genes. Three of these genes, namely SLC16A2, RLIM, and NEXMIF, if impaired, can lead to syndromes presenting with ID. Of note, this duplicated region was located within a linkage interval with a LOD score >3.

conclusionOur report indicates that CNVs should be considered in multi-affected families where no candidate gene defect has been identified in sequencing data analysis.

Indexed as

Chromosome DuplicationChromosomes, Human, XGenetic Diseases, X-LinkedGenetic TestingHumansIntellectual DisabilityMaleMonocarboxylic Acid TransportersNerve Tissue ProteinsPedigreeSymportersUbiquitin-Protein LigasesWhole Genome SequencingMonocarboxylic Acid TransportersNerve Tissue ProteinsNEXMIF protein, humanRLIM protein, humanSLC16A2 protein, humanSymportersUbiquitin-Protein Ligasesintellectual disabilitywhole genome sequencingXq13.2q13.3Xq duplication

Identifiers

PMID32715656
PMCPMC7549592
OpenAlexW3044356276

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