ArticleBMC plant biology2020
Genome-wide identification and expression analysis of YTH domain-containing RNA-binding protein family in common wheat.
Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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38 citing papers in PubMed, 54 citations in OpenAlex.
- Genome-wide identification and expression analysis of YTH domain-containing RNA-binding protein family in maize reveals their potential role under abiotic stresses.Scientific reports · 2026Article
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- Genome-wide identification and analysis of YTH gene family and its response to MeJA and salt treatment in Panax ginseng C. A. Meyer.BMC plant biology · 2025Article
- RNA methylation modifications in neurodegenerative diseases: Focus on their enzyme system.Journal of advanced research · 2025Review
- The role of NTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Review
- Multi-Environment QTL Mapping of Rust Resistance in Faba Bean (Plants (Basel, Switzerland) · 2025Article
- hnRNPH1: A Multifaceted Regulator in RNA Processing and Disease Pathogenesis.International journal of molecular sciences · 2025Review
- Combined multi-omics and physiological approaches to elucidate drought-response mechanisms of durum wheat.Frontiers in plant science · 2025Article
- Genome-Wide Identification and Expression Analysis of Members in the YT521-B Homology Domain-Containing RNA Binding Protein Family inPlants (Basel, Switzerland) · 2024Article
- Genome-wide identification of m6A-related gene family and the involvement of TdFIP37 in salt stress in wild emmer wheat.Plant cell reports · 2024Article
- N6-methyladenosine RNA modification regulates photoperiod sensitivity in cotton.Plant physiology · 2024Article
- Identification of mBiochemistry and biophysics reports · 2024Article
- Genome-Wide Identification and Expression Analysis of the YTH Domain-Containing RNA-Binding Protein Family inInternational journal of molecular sciences · 2024Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2024Article
- Genome-wide identification of the NBMC plant biology · 2024Article
- Genome-wide identification, characterization, and expression analysis of m6A readers-YTH domain-containing genes in alfalfa.BMC genomics · 2024Article
- ECT2 peptide sequences outside the YTH domain regulate its mRNA biology · 2024Article
- The plant cytosolic mPlant communications · 2023Article
- The emerging role of epitranscriptome in shaping stress responses in plants.Plant cell reports · 2023Review
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5 authors at 1 institution in 1 country.
Funding
Abstract
backgroundN6-Methyladenosine (m6A) is the most widespread RNA modification that plays roles in the regulation of genes and genome stability. YT521-B homology (YTH) domain-containing RNA-binding proteins are important RNA binding proteins that affect the fate of m6A-containing RNA by binding m6A. Little is known about the YTH genes in common wheat (Triticum aestivum L.), one of the most important crops for humans.
resultsA total of 39 TaYTH genes were identified in common wheat, which are comprised of 13 homologous triads, and could be mapped in 18 out of the 21 chromosomes. A phylogenetic analysis revealed that the TaYTHs could be divided into two groups: YTHDF (TaDF) and YTHDC (TaDC). The TaYTHs in the same group share similar motif distributions and domain organizations, which indicates functional similarity between the closely related TaYTHs. The TaDF proteins share only one domain, which is the YTH domain. In contrast, the TaDCs possess three C3H1-type zinc finger repeats at their N-termini in addition to their central YTH domain. In TaDFs, the predicated aromatic cage pocket that binds the methylysine residue of m6A is composed of tryptophan, tryptophan, and tryptophan (WWW). In contrast, the aromatic cage pocket in the TaDCs is composed of tryptophan, tryptophan, and tyrosine (WWY). In addition to the general aspartic acid or asparagine residue used to form a hydrogen bond with N
conclusionsIn this study, we identified 39 TaYTH genes from common wheat. The phylogenetic structure, chromosome distribution, and patterns of expression of these genes and their protein structures were analyzed. Our results provide a foundation for the functional analysis of TaYTHs in the future.
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