Evidence map›Paper›PMID 32713300›Full record

ReviewPhilosophical transactions of the Royal Society of London. Series B, Biological sciences2020

Modelling collective cell motion: are on- and off-lattice models equivalent?

Josué Manik Nava-Sedeño, Anja Voß-Böhme, Haralampos Hatzikirou, Andreas Deutsch, Fernando Peruani

Open access · bronzeAbstract readReview
In one paragraph

Review in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 13 citations in OpenAlex.

  1. Physical models of embryonic epithelial healing.PLoS computational biology · 2026
    Review
  2. Review
  3. Multi-scale analysis and modelling of collective migration in biological systems.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Josué Manik Nava-SedeñoTechnische Universität Dresden, Center for Information Services and High Performance Computing, Nöthnitzer Straße 46, 01062 Dresden, Germany.
Anja Voß-BöhmeTechnische Universität Dresden, Center for Information Services and High Performance Computing, Nöthnitzer Straße 46, 01062 Dresden, Germany.
Haralampos HatzikirouDepartment of Systems Immunology and Braunschweig Integrated Center of Systems Biology, Helmholtz Center for Infection Research, Inhoffenstraße 7, 38124 Braunschweig, Germany.
Andreas DeutschTechnische Universität Dresden, Center for Information Services and High Performance Computing, Nöthnitzer Straße 46, 01062 Dresden, Germany.
Fernando PeruaniLaboratoire J. A. Dieudonné, Université Côte d'Azur, UMR 7351 CNRS, Parc Valrose, 06108 Nice Cedex 02, France.
Technische Universität Dresden · DECentre National de la Recherche Scientifique · FRHelmholtz Centre for Infection Research · DEHTW Berlin - University of Applied Sciences · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological processes, such as embryonic development, wound repair and cancer invasion, or bacterial swarming and fruiting body formation, involve collective motion of cells as a coordinated group. Collective cell motion of eukaryotic cells often includes interactions that result in polar alignment of cell velocities, while bacterial patterns typically show features of apolar velocity alignment. For analysing the population-scale effects of these different alignment mechanisms, various on- and off-lattice agent-based models have been introduced. However, discriminating model-specific artefacts from general features of collective cell motion is challenging. In this work, we focus on equivalence criteria at the population level to compare on- and off-lattice models. In particular, we define prototypic off- and on-lattice models of polar and apolar alignment, and show how to obtain an on-lattice from an off-lattice model of velocity alignment. By characterizing the behaviour and dynamical description of collective migration models at the macroscopic level, we suggest the type of phase transitions and possible patterns in the approximative macroscopic partial differential equation descriptions as informative equivalence criteria between on- and off-lattice models. This article is part of the theme issue 'Multi-scale analysis and modelling of collective migration in biological systems'.

Indexed as

Cell MovementModels, Biologicalalignment interactionscellular automatacollective motionoff-lattice modelon-lattice model

Identifiers

PMID32713300
PMCPMC7423376
OpenAlexW3043824801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.