ArticleGenes & genomics2020
Expression and evolution of the phospholipase C gene family in Brachypodium distachyon.
Article in Genes & genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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Who cites it
4 citing papers in PubMed, 8 citations in OpenAlex.
- Plant PI-PLC signaling in stress and development.Plant physiology · 2025Review
- Phospholipase C: Diverse functions in plant biotic stress resistance and fungal pathogenicity.Molecular plant pathology · 2023Review
- Identification and expression analysis of phospholipase C family genes between different male fertility accessions in pepper.Protoplasma · 2022Article
- Genome-wide characterization and expression profiling of the Phospholipase C (PLC) gene family in three orchids of economic importance.Journal, genetic engineering & biotechnology · 2021Article
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPhospholipase C (PLC) is an enzyme that hydrolyzes phospholipids and plays an important role in plant growth and development. The Brachypodium distachyon is a model plant of Gramineae, but the research on PLC gene family of Brachypodium has not been reported.
objectiveThis study was performed to identify the PLC family gene in Brachypodium and to determine the expression profiles of PLCs under the abiotic stress.
methodsComplete genome sequences and transcriptomes of Brachypodium were downloaded from the PLAZA. The hidden Markov model-based profile of the conserved PLC domain was submitted as a query to identify all potential PLC domain sequences with HMMER software. Expression profiles of BdPLCs were obtained based on the qRT-PCR analysis.
resultsThere were 8 PLC genes in Brachypodium (BdPI-PLCs 1-4 and BdNPCs 1-4). All members of BdPI-PLC had three conserved domains of X, Y, and C2, and no EF-hand was found. All BdNPCs contained a phosphatase domain. BdPI-PLC genes were distributed on Chr1, Chr2 and Chr4, with different types and numbers of cis-regulatory elements in their respective gene promoters. Phylogenetic analysis showed that the genetic relationship between Brachypodium and rice was closer than Arabidopsis. The expression patterns of BdPI-PLC gene under abiotic stresses (drought, low temperature, high temperature and salt stress) were up-regulated, indicated their important roles in response to low temperature, high temperature, drought and salt stresses.
conclusionsThis study provides comprehensive information for the study of Brachypodium PLC gene family and lays a foundation for further research on the molecular mechanism of Brachypodium stress adaptation.
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