Evidence map›Paper›PMID 32710902›Full record

ArticleProgress in biophysics and molecular biology2021

In-silico human electro-mechanical ventricular modelling and simulation for drug-induced pro-arrhythmia and inotropic risk assessment.

Francesca Margara, Zhinuo J Wang, Francesc Levrero-Florencio, Alfonso Santiago, Mariano Vázquez, Alfonso Bueno-Orovio, Blanca Rodriguez

Open access · hybridAbstract read
In one paragraph

Article in Progress in biophysics and molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 99 citations in OpenAlex.

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  15. Frontiers in pharmacology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Francesca MargaraDepartment of Computer Science, University of Oxford, Parks Road OX1 3QD, Oxford, United Kingdom. Electronic address: francesca.margara@keble.ox.ac.uk.
Zhinuo J WangDepartment of Computer Science, University of Oxford, Parks Road OX1 3QD, Oxford, United Kingdom. Electronic address: jenny.wang@cs.ox.ac.uk.
Francesc Levrero-FlorencioDepartment of Computer Science, University of Oxford, Parks Road OX1 3QD, Oxford, United Kingdom. Electronic address: f.levrero.florencio@gmail.com.
Alfonso SantiagoBarcelona Supercomputing Center - Centro Nacional de Supercomputación, C/Jordi Girona 29, Barcelona, 08034, Spain. Electronic address: alfonso.santiago@bsc.es.
Mariano VázquezBarcelona Supercomputing Center - Centro Nacional de Supercomputación, C/Jordi Girona 29, Barcelona, 08034, Spain; ELEM Biotech, Spain. Electronic address: mariano.vazquez@bsc.es.
Alfonso Bueno-OrovioDepartment of Computer Science, University of Oxford, Parks Road OX1 3QD, Oxford, United Kingdom. Electronic address: alfonso.bueno@cs.ox.ac.uk.
Blanca RodriguezDepartment of Computer Science, University of Oxford, Parks Road OX1 3QD, Oxford, United Kingdom. Electronic address: blanca.rodriguez@cs.ox.ac.uk.
University of Oxford · GBBarcelona Supercomputing Center · ES

Funding

British Heart Foundation FS/17/22/32644British Heart Foundation RE/13/1/30181Wellcome Trust 214290/Z/18/Z
6 · The paper itself

Abstract

Human-based computational modelling and simulation are powerful tools to accelerate the mechanistic understanding of cardiac patho-physiology, and to develop and evaluate therapeutic interventions. The aim of this study is to calibrate and evaluate human ventricular electro-mechanical models for investigations on the effect of the electro-mechanical coupling and pharmacological action on human ventricular electrophysiology, calcium dynamics, and active contraction. The most recent models of human ventricular electrophysiology, excitation-contraction coupling, and active contraction were integrated, and the coupled models were calibrated using human experimental data. Simulations were then conducted using the coupled models to quantify the effects of electro-mechanical coupling and drug exposure on electrophysiology and force generation in virtual human ventricular cardiomyocytes and tissue. The resulting calibrated human electro-mechanical models yielded active tension, action potential, and calcium transient metrics that are in agreement with experiments for endocardial, epicardial, and mid-myocardial human samples. Simulation results correctly predicted the inotropic response of different multichannel action reference compounds and demonstrated that the electro-mechanical coupling improves the robustness of repolarisation under drug exposure compared to electrophysiology-only models. They also generated additional evidence to explain the partial mismatch between in-silico and in-vitro experiments on drug-induced electrophysiology changes. The human calibrated and evaluated modelling and simulation framework constructed in this study opens new avenues for future investigations into the complex interplay between the electrical and mechanical cardiac substrates, its modulation by pharmacological action, and its translation to tissue and organ models of cardiac patho-physiology.

Indexed as

Computer SimulationModels, CardiovascularAction PotentialsArrhythmias, CardiacBiomechanical PhenomenaCalciumDrug-Related Side Effects and Adverse ReactionsElectrophysiological PhenomenaHeart VentriclesHumansMyocardial ContractionMyocytes, CardiacRisk AssessmentCalciumComputational modellingComputer simulationDrug safetyHuman cardiac contractionHuman ventricular action potentialIn-silico drug trials

Identifiers

PMID32710902
PMCPMC7848595
OpenAlexW3042519486

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.