Evidence map›Paper›PMID 32710823›Full record

ArticleBiophysical journal2020

Sphingomyelins and ent-Sphingomyelins Form Homophilic Nano-Subdomains within Liquid Ordered Domains.

Yo Yano, Shinya Hanashima, Hiroshi Tsuchikawa, Tomokazu Yasuda, J Peter Slotte, Erwin London, Michio Murata

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Polar Glycerolipids and Membrane Lipid Rafts.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Yo YanoDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan; ERATO, Lipid Active Structure Project, Japan Science and Technology Agency, Graduate School of Science, Osaka University, Osaka, Japan.
Shinya HanashimaDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan.
Hiroshi TsuchikawaDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan.
Tomokazu YasudaDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan.
J Peter SlotteBiochemistry, Faculty of Science and Engineering, Åbo Akademi University, Turku, Finland.
Erwin LondonDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York. Electronic address: erwin.london@stonybrook.edu.
Michio MurataDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan; ERATO, Lipid Active Structure Project, Japan Science and Technology Agency, Graduate School of Science, Osaka University, Osaka, Japan. Electronic address: murata@chem.sci.osaka-u.ac.jp.
Osaka University · JPÅbo Akademi University · FIStony Brook University · US

Funding

TRANSFORMATIVE LIPID EXCHANGE APPROACHES TO STUDY MEMBRANE ORGANIZATIONR35GM122493 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI Erwin London · 2017 to 2026
$5.6M
DEFINING PRINCIPLES AND FUNCTIONS OF MEMBRANE ORGANIZATION USING ASYMMETRIC VESICLESR01GM112638 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI LONDON, ERWIN · 2015 to 2017
$922k
NIGMS NIH HHS R01 GM112638NIGMS NIH HHS R35 GM122493
6 · The paper itself

Abstract

Sphingomyelin (SM), a major component of small domains (or lipid rafts) in mammalian cell membranes, forms a liquid-ordered phase in the presence of cholesterol (Cho). However, the nature of molecular interactions within the ordered SM/Cho phase remains elusive. We previously revealed that stearoyl-SM (SSM) and its enantiomer (ent-SSM) separately form nano-subdomains within the liquid-ordered phase involving homophilic SSM-SSM and ent-SSM-ent-SSM interactions. In this study, the details of the subdomain formation by SSMs at the nanometer range were examined using Förster resonance energy transfer (FRET) measurements in lipid bilayers containing SSM and ent-SSM, dioleoyl-phosphatidylcholine and Cho. Although microscopy detected a stereochemical effect on partition coefficient favoring stereochemically homophilic interactions in the liquid-ordered state, it showed no significant difference in large-scale liquid-ordered domain formation by the two stereoisomers. In contrast to the uniform domains seen microscopy, FRET analysis using fluorescent donor- and acceptor-labeled SSM showed distinct differences in SM and ent-SM colocalization within nanoscale distances. Donor- and acceptor-labeled SSM showed significantly higher FRET efficiency than did donor-labeled SSM and acceptor-labeled ent-SSM in lipid vesicles composed of "racemic" (1:1) mixtures of SSM/ent-SSM with dioleoylphosphatidylcholine and Cho. The difference in FRET efficiency indicated that SSM and ent-SSM assemble to form separate nano-subdomains. The average size of the subdomains decreased as temperature increased, and at physiological temperatures, the subdomains were found to have a single-digit nanometer radius. These results suggest that (even in the absence of ent-SM) SM-SM interactions play a crucial role in forming nano-subdomains within liquid-ordered domains and may be a key feature of lipid microdomains (or rafts) in biological membranes.

Indexed as

PhosphatidylcholinesSphingomyelinsAnimalsCell MembraneCholesterolLipid BilayersMembrane MicrodomainsCholesterolLipid BilayersPhosphatidylcholinesSphingomyelins

Identifiers

PMID32710823
PMCPMC7399500
OpenAlexW3039266805

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.