Evidence map›Paper›PMID 32710616›Full record

ArticleNucleic acids research2020

Chromatin recruitment of OGG1 requires cohesin and mediator and is essential for efficient 8-oxoG removal.

Emilie Lebraud, Guillaume Pinna, Capucine Siberchicot, Jordane Depagne, Didier Busso, Damiano Fantini, Lamya Irbah, Elena Robeska, Gueorgui Kratassiouk, Jean-Luc Ravanat and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

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  14. OGG1 in the Kidney: Beyond Base Excision Repair.Oxidative medicine and cellular longevity · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Emilie LebraudInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Guillaume PinnaInstitute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, F-91198 Gif-sur-Yvette, France.
Capucine SiberchicotInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Jordane DepagneInstitute of Cellular and Molecular Radiobiology, U1274 INSERM, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Didier BussoInstitute of Cellular and Molecular Radiobiology, U1274 INSERM, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Damiano FantiniInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Lamya IrbahInstitute of Cellular and Molecular Radiobiology, U1274 INSERM, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Elena RobeskaInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Gueorgui KratassioukInstitute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris-Sud, Université Paris-Saclay, F-91198 Gif-sur-Yvette, France.
Jean-Luc RavanatUniv. Grenoble Alpes, CEA, CNRS IRIG/SyMMES, F-38054 Grenoble, France.
Bernd EpeInstitute of Pharmaceutical and Biomedical Sciences, University of Mainz, Germany.
J Pablo RadicellaInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Anna CampalansInstitut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 18 route du Panorama, F-92265 Fontenay-aux-Roses, France.
Université Paris Cité · FRInserm · FRUniversité Paris-Sud · FRCentre National de la Recherche Scientifique · FRJohannes Gutenberg University Mainz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the most abundant DNA lesions induced by oxidative stress is the highly mutagenic 8-oxoguanine (8-oxoG), which is specifically recognized by 8-oxoguanine DNA glycosylase 1 (OGG1) to initiate its repair. How DNA glycosylases find small non-helix-distorting DNA lesions amongst millions of bases packaged in the chromatin-based architecture of the genome remains an open question. Here, we used a high-throughput siRNA screening to identify factors involved in the recognition of 8-oxoG by OGG1. We show that cohesin and mediator subunits are required for re-localization of OGG1 and other base excision repair factors to chromatin upon oxidative stress. The association of OGG1 with euchromatin is necessary for the removal of 8-oxoG. Mediator subunits CDK8 and MED12 bind to chromatin and interact with OGG1 in response to oxidative stress, suggesting they participate in the recruitment of the DNA glycosylase. The oxidative stress-induced association between the cohesin and mediator complexes and OGG1 reveals an unsuspected function of those complexes in the maintenance of genomic stability.

Indexed as

Cell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA GlycosylasesDNA RepairEuchromatinGenomic InstabilityGuanineHeLa CellsHumansOxidative StressRNA, Small InterferingTransfection8-hydroxyguanineCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA GlycosylasesEuchromatinGuanineoxoguanine glycosylase 1, humanRNA, Small Interfering

Identifiers

PMID32710616
PMCPMC7498353
OpenAlexW3045191935

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.