Evidence map›Paper›PMID 32709900›Full record

ArticleNature communications2020

Accounting for diverse evolutionary forces reveals mosaic patterns of selection on human preterm birth loci.

Abigail L LaBella, Abin Abraham, Yakov Pichkar, Sarah L Fong, Ge Zhang, Louis J Muglia, Patrick Abbot, Antonis Rokas, John A Capra

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Maternal-fetal conflict and the timing of birth.Evolution, medicine, and public health · 2025
    Review
  4. Article
  5. Article
  6. Microbiome-associated human genetic variants impact phenome-wide disease risk.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. The obstetrical dilemma hypothesis: there's life in the old dog yet.Biological reviews of the Cambridge Philosophical Society · 2021
    Article
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Abigail L LaBella *Department of Biological Sciences, Vanderbilt University, Nashville, TN, 37235, USA.ORCID http://orcid.org/0000-0003-0068-6703
Abin Abraham *Vanderbilt Genetics Institute, Vanderbilt University, Nashville, TN, 37235, USA.ORCID http://orcid.org/0000-0002-9951-2879
Yakov PichkarDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, 37235, USA.ORCID http://orcid.org/0000-0001-9231-2180
Sarah L FongVanderbilt Genetics Institute, Vanderbilt University, Nashville, TN, 37235, USA.ORCID http://orcid.org/0000-0003-0900-5505
Ge ZhangDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA.
Louis J MugliaDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229, USA.ORCID http://orcid.org/0000-0002-0301-8770
Patrick AbbotDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, 37235, USA.
Antonis RokasDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, 37235, USA. antonis.rokas@vanderbilt.edu.ORCID http://orcid.org/0000-0002-7248-6551
John A CapraDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, 37235, USA. tony.capra@vanderbilt.edu.ORCID http://orcid.org/0000-0001-9743-1795
Vanderbilt University · USCincinnati Children's Hospital Medical Center · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
Medical Scientist Training ProgramT32GM152284 · NIGMS · VANDERBILT UNIVERSITY · PI Christopher S. Williams · 2024 to 2026
$4.8M
The Evolution of Gene Regulation and Human DiseaseR35GM127087 · NIGMS · VANDERBILT UNIVERSITY · PI John Anthony Capra · 2018 to 2026
$3.2M
NIGMS NIH HHS R35 GM127087NIGMS NIH HHS T32 GM007347NIGMS NIH HHS T32 GM152284
6 · The paper itself

Abstract

Currently, there is no comprehensive framework to evaluate the evolutionary forces acting on genomic regions associated with human complex traits and contextualize the relationship between evolution and molecular function. Here, we develop an approach to test for signatures of diverse evolutionary forces on trait-associated genomic regions. We apply our method to regions associated with spontaneous preterm birth (sPTB), a complex disorder of global health concern. We find that sPTB-associated regions harbor diverse evolutionary signatures including conservation, excess population differentiation, accelerated evolution, and balanced polymorphism. Furthermore, we integrate evolutionary context with molecular evidence to hypothesize how these regions contribute to sPTB risk. Finally, we observe enrichment in signatures of diverse evolutionary forces in sPTB-associated regions compared to genomic background. By quantifying multiple evolutionary forces acting on sPTB-associated regions, our approach improves understanding of both functional roles and the mosaic of evolutionary forces acting on loci. Our work provides a blueprint for investigating evolutionary pressures on complex traits.

Indexed as

Evolution, MolecularGenomeAllelesFemaleGene Expression Regulation, DevelopmentalHumansMultifactorial InheritancePhenotypePregnancyPremature Birth

Identifiers

PMID32709900
PMCPMC7382462
OpenAlexW3044309948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.