Evidence map›Paper›PMID 32708269›Full record

ArticleGenes2020

Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of

Delil A Chincoya, Alejandro Sanchez-Flores, Karel Estrada, Clara E Díaz-Velásquez, Antonio González-Rodríguez, Felipe Vaca-Paniagua, Patricia Dávila, Salvador Arias, Sofía Solórzano

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Characterizing the chloroplast genome ofMitochondrial DNA. Part B, Resources · 2023
    Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Delil A ChincoyaLaboratorio de Ecología Molecular y Evolución, Unidad de Biotecnología y Prototipos FES Iztacala, Universidad Nacional Autónoma de México, Avenida de los Barrios 1, Los Reyes Iztacala, Tlalnepantla de Baz 54090, Mexico.
Alejandro Sanchez-FloresInstituto de Biotecnología, Unidad Universitaria de Secuenciación Masiva y Bioinformática, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Chamilpa, Cuernavaca 62250, Mexico.ORCID 0000-0003-0476-3139
Karel EstradaInstituto de Biotecnología, Unidad Universitaria de Secuenciación Masiva y Bioinformática, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Chamilpa, Cuernavaca 62250, Mexico.
Clara E Díaz-VelásquezLaboratorio Nacional en Salud, Diagnóstico Molecular y Efecto Ambiental en Enfermedades Crónico-Degenerativas, FES Iztacala, Universidad Nacional Autónoma de México, Los Reyes Iztacala, Tlalnepantla de Baz 54090, Mexico.
Antonio González-RodríguezLaboratorio de Genética de la Conservación, Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México, Antigua Carretera a Pátzcuaro 8701, Ex-Hacienda San José La Huerta, Morelia 58190, Mexico.
Felipe Vaca-PaniaguaLaboratorio Nacional en Salud, Diagnóstico Molecular y Efecto Ambiental en Enfermedades Crónico-Degenerativas, FES Iztacala, Universidad Nacional Autónoma de México, Los Reyes Iztacala, Tlalnepantla de Baz 54090, Mexico.
Patricia DávilaLaboratorio de Recursos Naturales, Unidad de Biotecnología y Prototipos, FES Iztacala, Universidad Nacional Autónoma de México, Avenida de los Barrios 1, Los Reyes Iztacala, Tlalnepantla de Baz 54090, Mexico.
Salvador AriasJardín Botánico, Instituto de Biología, Universidad Nacional Autónoma de México, Tercer Circuito Exterior, Ciudad Universitaria, Coyoacán, Ciudad de México 04510, Mexico.ORCID 0000-0002-7674-7050
Sofía SolórzanoLaboratorio de Ecología Molecular y Evolución, Unidad de Biotecnología y Prototipos FES Iztacala, Universidad Nacional Autónoma de México, Avenida de los Barrios 1, Los Reyes Iztacala, Tlalnepantla de Baz 54090, Mexico.ORCID 0000-0001-6251-0688
Autonomous University of Tlaxcala · MXUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants, partial DNA sequences of chloroplasts have been widely used in evolutionary studies. However, the Cactaceae family (1500-1800 species) lacks molecular markers that allow a phylogenetic resolution between species and genera. In order to identify sequences with high variation levels, we compared previously reported complete chloroplast genomes of seven species of

Indexed as

Genome, ChloroplastPolymorphism, GeneticCaryophyllaceaeGenetic LociMicrosatellite RepeatslocusMammillariamolecular variationnon-coding regionsrepeated sequencesSSRs

Identifiers

PMID32708269
PMCPMC7397273
OpenAlexW3044496912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.