Evidence map›Paper›PMID 32705366›Full record

ArticleFunctional & integrative genomics2020

Identification and characterization of Dicer-like genes in leaf rust pathogen (Puccinia triticina) of wheat.

Himanshu Dubey, Kanti Kiran, Rajdeep Jaswal, Subhash C Bhardwaj, Tapan Kumar Mondal, Neha Jain, N K Singh, Arvind M Kayastha, Tilak Raj Sharma

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Article in Functional & integrative genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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  4. ComprehensiveBioMed research international · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Himanshu DubeyICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
Kanti KiranICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
Rajdeep JaswalICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
Subhash C BhardwajICAR-Indian Institute of Wheat and Barley Research, Regional Station, Flowerdale, Shimla, 171009, India.
Tapan Kumar MondalICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
Neha JainICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
N K SinghICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India.
Arvind M KayasthaSchool of Biotechnology, Institute of Science, Banaras Hindu University, Varanasi, 221005, India. kayasthabhu@gmail.com.
Tilak Raj SharmaICAR-National Institute for Plant Biotechnology (formerly ICAR-National Research Centre on Plant Biotechnology), Pusa Campus, New Delhi, 110012, India. trsharma1965@gmail.com.
National Research Centre on Plant Biotechnology · INBanaras Hindu University · INIndian Council of Agricultural Research · INIndian Institute of Wheat and Barley Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Puccinia triticina (P. triticina) is one of the most devastating fungal pathogens of wheat which causes significant annual yield loss to the crop. Understanding the gene regulatory mechanism of the biotrophic pathogen is one of the important aspects of host-pathogen interaction studies. Dicer-like genes are considered as important mediators of RNAi-based gene regulation. In this study, we report the presence of three Dicer-like genes (Pt-DCL1, Pt-DCL2, Pt-DCL3) in P. triticina genome identified through computational and biological analyses. Quantitative real-time PCR studies revealed an increase in the expression of these genes in germinating spore stages. Heterologous expression combined with mass spectrometry analysis of Pt-DCL2 confirmed the presence of a canonical Dicer-like gene in P. triticina. Phylogenetic analysis of the Pt-DCLs with the Dicer-like proteins from other organisms showed a distinct cluster of rust pathogens from the order Pucciniales. The results indicated a species-specific duplication of Dicer-like genes within the wheat rust pathogens. This study, for the first time, reports the presence of Dicer-dependent RNAi pathway in P. triticina that may play a role in gene regulatory mechanism of the pathogen during its development. Our study serves as a vital source of information for further RNAi-based molecular studies for better understanding and management of the wheat leaf rust disease.

Indexed as

Genes, FungalFungal ProteinsPhylogenyPucciniaRibonuclease IIITriticumFungal ProteinsRibonuclease IIIDicerPuccinia triticinaRNAi pathway

Identifiers

PMID32705366
OpenAlexW3044347673

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.