Evidence map›Paper›PMID 32699985›Full record

ArticleOncology and therapy2019

Validation of Cell-Free DNA Collection Tubes for Determination of EGFR Mutation Status in Liquid Biopsy from NSCLC Patients.

Marta Sesé, Rosa Somoza, Inmaculada Maestu, Maria Martín Ureste, Alfredo Sanchez, Juan Felipe Cordoba, Irene Sansano, Griselda Venturas, Santiago Ramón Y Cajal, Javier Hernández-Losa

Open access · goldAbstract read
In one paragraph

Article in Oncology and therapy, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Liquid Biopsy: The Way Forward for Precision Medicine.Indian journal of clinical biochemistry : IJCB · 2022
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Marta SeséTranslational Molecular Pathology, Vall d'Hebron Institute of Research (VHIR), Universitat Autònoma de Barcelona, Barcelona, Spain.
Rosa SomozaTranslational Molecular Pathology, Vall d'Hebron Institute of Research (VHIR), Universitat Autònoma de Barcelona, Barcelona, Spain.
Inmaculada MaestuDepartment of Medical Oncology, Hospital Universitario Doctor Peset, Valencia, Spain.
Maria Martín UresteDepartment of Medical Oncology, Hospital Universitario Doctor Peset, Valencia, Spain.
Alfredo SanchezDepartment of Medical Oncology, Consorci Hospitalari Provincial de Castelló, Castellón, Spain.
Juan Felipe CordobaDepartment of Medical Oncology, Hospital Universitari Arnau de Vilanova, Lleida, Spain.
Irene SansanoDepartment of Pathology, Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Griselda VenturasDepartment of Pathology, Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Santiago Ramón Y CajalTranslational Molecular Pathology, Vall d'Hebron Institute of Research (VHIR), Universitat Autònoma de Barcelona, Barcelona, Spain.
Javier Hernández-LosaTranslational Molecular Pathology, Vall d'Hebron Institute of Research (VHIR), Universitat Autònoma de Barcelona, Barcelona, Spain. jahernan@vhebron.net.ORCID http://orcid.org/0000-0003-1526-3201
Vall d'Hebron Hospital Universitari · ESHospital Universitario Doctor Peset · ESUniversitat Autònoma de Barcelona · ESConsorcio Hospitalario Provincial de Castellón · ESHospital Universitari Arnau de Vilanova · ESVall d'Hebron Institut de Recerca · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPrecision medicine has revolutionized the understanding and treatment of cancer by identifying subsets of patients who are amenable to specific treatments according to their molecular characteristics, as exemplified by epidermal growth factor receptor (EGFR) mutations in non-small cell lung cancer (NSCLC). Although tissue biopsy is the gold standard for determining molecular alterations in tumors, its limitations have prompted the development of new techniques for studying tumor biomarkers in liquid biopsies, such as mutation analysis in cell-free DNA (cfDNA). cfDNA analysis can accurately determine tumor progression and prognosis and more effectively identify appropriate targeted therapies. However, cfDNA is vulnerable, particularly during plasma sample shipping.

objectiveWe compared the cell- and DNA-stabilizing properties of cell-free DNA blood collection tubes (BCTs) with those of the traditional shipping method (frozen plasma) for EGFR mutation testing using the cobas

methodsIn total, 98 NSCLC samples, two from each patient, were studied; five of the 49 cases were considered invalid by cobas

resultsThe global agreement between the two methods was 95.4%, with 100% sensitivity and 94.6% specificity for the cfDNA BCTs. cfDNA BCTs had a positive predictive value of 81.8% and negative predictive value of 100%.

conclusioncfDNA BCTs have the same sensitivity for EGFR mutation analysis in liquid biopsy as the current methodology and very high specificity. They also have some additional advantages in terms of collection and further shipment. Therefore, cfDNA BCTs can be perfectly incorporated into the routine practice for EGFR mutation determination.

fundingRoche Farma S.A., Spain.

Indexed as

Blood collection tubescfDNAEGFR mutation analysisNSCLC

Identifiers

PMID32699985
PMCPMC7360002
OpenAlexW2969921450

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.