Evidence map›Paper›PMID 32699216›Full record

ArticleScientific reports2020

Conditional and unconditional genome-wide association study reveal complicate genetic architecture of human body weight and impacts of smoking.

Ting Xu, Md Mamun Monir, Xiang-Yang Lou, Haiming Xu, Jun Zhu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ting XuDepartment of Mathematics, Zhejiang University, Hangzhou, 310058, China.
Md Mamun MonirInstitute of Bioinformatics, Zhejiang University, Hangzhou, 310058, China.
Xiang-Yang LouDepartment of Biostatistics, University of Florida, Gainesville, FL, 32611, USA.
Haiming XuInstitute of Bioinformatics, Zhejiang University, Hangzhou, 310058, China. hmxu@zju.edu.cn.ORCID http://orcid.org/0000-0002-0675-4087
Jun ZhuDepartment of Mathematics, Zhejiang University, Hangzhou, 310058, China. jzhu@zju.edu.cn.ORCID http://orcid.org/0000-0002-9427-4517
Zhejiang University · CNUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To reveal the impacts of smoking on genetic architecture of human body weight, we conducted a genome-wide association study on 5,336 subjects in four ethnic populations from MESA (The Multi-Ethnic Study of Atherosclerosis) data. A full genetic model was applied to association mapping for analyzing genetic effects of additive, dominance, epistasis, and their ethnicity-specific effects. Both the unconditional model (base) and conditional model including smoking as a cofactor were investigated. There were 10 SNPs involved in 96 significant genetic effects detected by the base model, which accounted for a high heritability (61.78%). Gene ontology analysis revealed that a number of genetic factors are related to the metabolic pathway of benzopyrene, a main compound in cigarettes. Smoking may play important roles in genetic effects of dominance, dominance-related epistasis, and gene-ethnicity interactions on human body weight. Gene effect prediction shows that the genetic effects of smoking cessation on body weight vary from different populations.

Indexed as

Body WeightGenome-Wide Association StudyAtherosclerosisBenzopyrenesEpistasis, GeneticEthnicityGene OntologyGenotypeHumansPhenotypePolymorphism, Single NucleotideQuantitative Trait, HeritableSmokingBenzopyrenes

Identifiers

PMID32699216
PMCPMC7376032
OpenAlexW3044087890

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.