Evidence map›Paper›PMID 32699170›Full record

ArticleThe Plant cell2020

Regulation of Cell Type-Specific Immunity Networks in Arabidopsis Roots.

Charlotte Rich-Griffin, Ruth Eichmann, Marco U Reitz, Sophie Hermann, Katherine Woolley-Allen, Paul E Brown, Kate Wiwatdirekkul, Eddi Esteban, Asher Pasha, Karl-Heinz Kogel and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Root Meristem Maintenance Mechanisms are Key to Plant Defense Against Nanoplastics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  10. Review
  11. Article
  12. Article
  13. Integrative identification of key genes governingFrontiers in plant science · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. WeiTsing, the warrior of root battleground.Science China. Life sciences · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Charlotte Rich-GriffinSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0001-8212-9542
Ruth EichmannSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-9307-7773
Marco U ReitzSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-5494-8097
Sophie HermannInstitute of Phytopathology, Justus Liebig University, 35392 Giessen, Germany.ORCID 0000-0002-2583-3418
Katherine Woolley-AllenSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-6613-6184
Paul E BrownBioinformatics Research Technology Platform, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-8764-4583
Kate WiwatdirekkulDepartment of Computer Science, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0001-7250-4548
Eddi EstebanDepartment of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, Ontario M5S 3B2, Canada.ORCID 0000-0001-9016-9202
Asher PashaDepartment of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, Ontario M5S 3B2, Canada.ORCID 0000-0002-9315-0520
Karl-Heinz KogelInstitute of Phytopathology, Justus Liebig University, 35392 Giessen, Germany.ORCID 0000-0003-1226-003X
Nicholas J ProvartDepartment of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, Ontario M5S 3B2, Canada.ORCID 0000-0001-5551-7232
Sascha OttDepartment of Computer Science, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-5411-8114
Patrick SchäferSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom patrick-1.schaefer@uni-ulm.de.ORCID 0000-0002-0366-6858
University of Warwick · GBUniversity of Toronto · CAJustus-Liebig-Universität Gießen · DEUniversität Ulm · DE

Funding

Biotechnology and Biological Sciences Research Council BB/M017982/1
6 · The paper itself

Abstract

While root diseases are among the most devastating stresses in global crop production, our understanding of root immunity is still limited relative to our knowledge of immune responses in leaves. Considering that root performance is based on the concerted functions of its different cell types, we undertook a cell type-specific transcriptome analysis to identify gene networks activated in epidermis, cortex, and pericycle cells of Arabidopsis (

Indexed as

ArabidopsisArabidopsis ProteinsBasidiomycotaBinding SitesGene Expression Regulation, PlantGene Regulatory NetworksPlant CellsPlant ImmunityPlant RootsPlants, Genetically ModifiedPromoter Regions, GeneticSignal TransductionTrans-ActivatorsArabidopsis ProteinsAt5g64900 protein, ArabidopsisTrans-Activators

Identifiers

PMID32699170
PMCPMC7474276
OpenAlexW3044145779

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.