Evidence map›Paper›PMID 32698833›Full record

ArticleParasites & vectors2020

Identification and genotyping of Enterocytozoon bieneusi in wild Himalayan marmots (Marmota himalayana) and Alashan ground squirrels (Spermophilus alashanicus) in the Qinghai-Tibetan Plateau area (QTPA) of Gansu Province, China.

Jie Xu, Xin Wang, Huaiqi Jing, Shengkui Cao, Xiaofan Zhang, Yanyan Jiang, Jianhai Yin, Jianping Cao, Yujuan Shen

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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  7. First report on the molecular detection ofInternational journal for parasitology. Parasites and wildlife · 2023
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  8. Identification of NovelChina CDC weekly · 2023
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  9. Article
  10. Novel genotypes ofInternational journal for parasitology. Parasites and wildlife · 2022
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  11. First report ofParasitology · 2022
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  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jie XuNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
Xin WangNational Institute of Infectious Diseases, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.
Huaiqi JingNational Institute of Infectious Diseases, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.
Shengkui CaoNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
Xiaofan ZhangNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
Yanyan JiangNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
Jianhai YinNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
Jianping CaoNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China. caojp@yahoo.com.
Yujuan ShenNational Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China. shenyj@nipd.chinacdc.cn.
National Institute for Parasitic Diseases · CNNational Institute for Communicable Disease Control and Prevention · CN

Funding

National Key Research and Development Program of China 2017YFD0501300the Chinese Special Program for Scientific Research of Public Healt 201502021the National Science and Technology Major Program of China 2018ZX10201002-009the National Science and Technology Major Program of China 2018ZX10713001-004the National Science and Technology Major Program of China 2018ZX107134-404
6 · The paper itself

Abstract

backgroundEnterocytozoon bieneusi is the most frequently detected microsporidian species in humans and animals. Currently, to the best of our knowledge, no information on E. bieneusi infection in Himalayan marmots (Marmota himalayana) and Alashan ground squirrels (Spermophilus alashanicus) is available worldwide. The aim of the present study was to understand the occurrence and genetic characterizations of E. bieneusi in Himalayan marmots and Alashan ground squirrels in the Qinghai-Tibetan Plateau area (QTPA), Gansu Province, China.

methodsA total of 498 intestinal contents were collected from 399 Himalayan marmots and 99 Alashan ground squirrels in QTPA. These samples were screened for the presence of E. bieneusi by using nested polymerase chain reaction and sequencing of the internal transcribed spacer (ITS) region of the ribosomal RNA (rRNA) gene. The ITS-positive sequences were aligned and phylogenetically analyzed to determine the genotypes of E. bieneusi.

resultsThe average infection rate of E. bieneusi was 10.0% (50/498), with 11.8% (47/399) in Himalayan marmots and 3.0% (3/99) in Alashan ground squirrels. A total of 7 distinct E. bieneusi genotypes were confirmed: 1 known genotype, YAK1 (n = 18) and 6 novel genotypes, named as ZY37 (n = 27), HN39 (n = 1), HN96 (n = 1), SN45 (n = 1), XH47 (n = 1) and ZY83 (n = 1). All the genotypes obtained in the present study were classified into group 1.

conclusionsTo our knowledge, this is the first report of E. bieneusi in Himalayan marmots and Alashan ground squirrels in China. The identification of genotype YAK1 in the two rodent species expanded the host range of this genotype. All the seven genotypes were clustered into zoonotic group 1, suggesting that these animal species can be potential epidemiological vectors of zoonotic microsporidiosis caused by E. bieneusi and pose a threat to ecological security. It is necessary to strengthen management practices and surveillance in the investigated areas to reduce the risk of E. bieneusi infection from the two rodent species to humans.

Indexed as

AnimalsChinaDNA, FungalDNA, Ribosomal SpacerEnterocytozoonFecesGenotypeHost SpecificityMarmotaMicrosporidiosisPhylogenyPrevalenceRNA, RibosomalSciuridaeZoonosesDNA, FungalDNA, Ribosomal SpacerRNA, RibosomalAlashan ground squirrelsEnterocytozoon bieneusiHimalayan marmotsPrevalenceQinghai-Tibetan Plateau area

Identifiers

PMID32698833
PMCPMC7376879
OpenAlexW3044847777

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.