Evidence map›Paper›PMID 32697387›Full record

ArticleAnimal genetics2020

Genome-wide association study for feed efficiency in collective cage-raised rabbits under full and restricted feeding.

J P Sánchez, A Legarra, M Velasco-Galilea, M Piles, A Sánchez, O Rafel, O González-Rodríguez, M Ballester

Open access · hybridAbstract read
In one paragraph

Article in Animal genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Polymorphism withinAnimals : an open access journal from MDPI · 2023
    Article
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

J P SánchezAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.ORCID https://orcid.org/0000-0001-8639-6146
A LegarraGenPhySE, National Institute for Agronomic Research, Castanet-Tolosan, 31326, France.
M Velasco-GalileaAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.
M PilesAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.
A SánchezCentre for Research in Agricultural Genomics, Campus Universitat Autònoma de Barcelona, Cerdanyola, 08193, Spain.
O RafelAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.
O González-RodríguezAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.
M BallesterAnimal Breeding and Genetic Program, Institute of Agriculture and Food Research and Technology, Caldes de Montbui, 08140, Spain.
Institute of Agrifood Research and Technology · ESGénétique Physiologie et Systèmes d'Elevage · FRUniversitat Autònoma de Barcelona · ES

Funding

Feed-a-Gene 63353GENEF RTA2014-00015-C2-01GENEF2 RTI2018-097610-R-I00INIA-FE RTA2011-00064-00-00
6 · The paper itself

Abstract

Feed efficiency (FE) is one of the most economically and environmentally relevant traits in the animal production sector. The objective of this study was to gain knowledge about the genetic control of FE in rabbits. To this end, GWASs were conducted for individual growth under two feeding regimes (full feeding and restricted) and FE traits collected from cage groups, using 114 604 autosome SNPs segregating in 438 rabbits. Two different models were implemented: (1) an animal model with a linear regression on each SNP allele for growth trait; and (2) a two-trait animal model, jointly fitting the performance trait and each SNP allele content, for FE traits. This last modeling strategy is a new tool applied to GWAS and allows information to be considered from non-genotyped individuals whose contribution is relevant in the group average traits. A total of 189 SNPs in 17 chromosomal regions were declared to be significantly associated with any of the five analyzed traits at a chromosome-wide level. In 12 of these regions, 20 candidate genes were proposed to explain the variation of the analyzed traits, including genes such as FTO, NDUFAF6 and CEBPA previously associated with growth and FE traits in monogastric species. Candidate genes associated with behavioral patterns were also identified. Overall, our results can be considered as the foundation for future functional research to unravel the actual causal mutations regulating growth and FE in rabbits.

Indexed as

Genome-Wide Association StudyAnimalsCaloric RestrictionEatingRabbitscandidate genefeed efficiencygenome-wide association studygrowthpooled recordsrabbitrestricted feeding

Identifiers

PMID32697387
PMCPMC7540659
OpenAlexW3045468256

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.