Evidence map›Paper›PMID 32695825›Full record

ArticleBioMed research international2020

Identification of Differentially Expressed Genes in Different Types of Broiler Skeletal Muscle Fibers Using the RNA-seq Technique.

Han Wang, Zhonghao Shen, Xiaolong Zhou, Songbai Yang, Feifei Yan, Ke He, Ayong Zhao

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Effects ofFrontiers in veterinary science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Han WangCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0002-4327-8884
Zhonghao ShenCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0002-3408-1422
Xiaolong ZhouCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0002-7174-7756
Songbai YangCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0001-6949-086X
Feifei YanCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0003-4657-7772
Ke HeCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0001-6446-9439
Ayong ZhaoCollege of Animal Science and Technology, ·College of Veterinary Medicine, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.ORCID https://orcid.org/0000-0001-8789-7858
Zhejiang A & F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The difference in muscle fiber types is very important to the muscle development and meat quality of broilers. At present, the molecular regulation mechanisms of skeletal muscle fiber-type transformation in broilers are still unclear. In this study, differentially expressed genes between breast and leg muscles in broilers were analyzed using RNA-seq. A total of 767 DEGs were identified. Compared with leg muscle, there were 429 upregulated genes and 338 downregulated genes in breast muscle. Gene Ontology (GO) enrichment indicated that these DEGs were mainly involved in cellular processes, single organism processes, cells, and cellular components, as well as binding and catalytic activity. KEGG analysis shows that a total of 230 DEGs were mapped to 126 KEGG pathways and significantly enriched in the four pathways of glycolysis/gluconeogenesis, starch and sucrose metabolism, insulin signalling pathways, and the biosynthesis of amino acids. Quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) was used to verify the differential expression of 7 selected DEGs, and the results were consistent with RNA-seq data. In addition, the expression profile of

Indexed as

Gene Expression ProfilingGene Expression RegulationRNA-SeqAnimalsChickensGene OntologyMolecular Sequence AnnotationMuscle Fibers, SkeletalMyosin Heavy ChainsReal-Time Polymerase Chain ReactionReproducibility of ResultsSatellite Cells, Skeletal MuscleMyosin Heavy Chains

Identifiers

PMID32695825
PMCPMC7362283
OpenAlexW3039959760

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.