Evidence map›Paper›PMID 32695415›Full record

ArticleIUCrJ2020

Paired refinement under the control of

Martin Malý, Kay Diederichs, Jan Dohnálek, Petr Kolenko

Abstract read
In one paragraph

Article in IUCrJ, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Crystallization and 1.6 Å resolution crystal structure of an acylated GLP-1/GIP analogue peptide.Acta crystallographica. Section F, Structural biology communications · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Improving macromolecular structure refinement with metal-coordination restraints.Acta crystallographica. Section D, Structural biology · 2024
    Article
  13. The vacuolar KScience advances · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia.Acta crystallographica. Section F, Structural biology communications · 2023
    Article
  18. Article
  19. Article
  20. The CCP4 suite: integrative software for macromolecular crystallography.Acta crystallographica. Section D, Structural biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Martin MalýFaculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, Prague 11519, Czech Republic.ORCID https://orcid.org/0000-0002-6081-9291
Kay DiederichsUniversity of Konstanz, Box M647, Konstanz 78457, Germany.ORCID https://orcid.org/0000-0001-5360-0905
Jan DohnálekInstitute of Biotechnology of the Czech Academy of Sciences, Biocev, Průmyslová 595, Vestec 25250, Czech Republic.ORCID https://orcid.org/0000-0002-8083-7980
Petr KolenkoFaculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, Prague 11519, Czech Republic.ORCID https://orcid.org/0000-0002-4619-9276

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crystallographic resolution is a key characteristic of diffraction data and represents one of the first decisions an experimenter has to make in data evaluation. Conservative approaches to the high-resolution cutoff determination are based on a number of criteria applied to the processed X-ray diffraction data only. However, high-resolution data that are weaker than arbitrary cutoffs can still result in the improvement of electron-density maps and refined structure models. Therefore, the impact of reflections from resolution shells higher than those previously used in conservative structure refinement should be analysed by the paired refinement protocol. For this purpose, a tool called

Indexed as

high-resolution limitmacromolecular crystallographypaired refinementPAIREFX-ray diffraction

Identifiers

PMID32695415
PMCPMC7340264

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.