Evidence map›Paper›PMID 32694532›Full record

ArticleNature communications2020

Ethanol exposure increases mutation rate through error-prone polymerases.

Karin Voordeckers, Camilla Colding, Lavinia Grasso, Benjamin Pardo, Lore Hoes, Jacek Kominek, Kim Gielens, Kaat Dekoster, Jonathan Gordon, Elisa Van der Zande and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 5 countries.

Karin VoordeckersLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.
Camilla ColdingDepartment of Biology, University of Copenhagen, Ole Maaloees Vej 5, DK-2200, Copenhagen N, Denmark.
Lavinia GrassoInstitut de Génétique Humaine, CNRS and Université de Montpellier, 141 rue de la Cardonille, Montpellier, France.
Benjamin PardoInstitut de Génétique Humaine, CNRS and Université de Montpellier, 141 rue de la Cardonille, Montpellier, France.ORCID http://orcid.org/0000-0002-4760-1263
Lore HoesLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.
Jacek KominekLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.ORCID http://orcid.org/0000-0002-1916-0122
Kim GielensLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.
Kaat DekosterLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.ORCID http://orcid.org/0000-0001-8995-6831
Jonathan GordonLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.
Elisa Van der ZandeLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.ORCID http://orcid.org/0000-0001-6238-4140
Peter BirchamLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium.
Toon SwingsCentre of Microbial and Plant Genetics, KU Leuven, Kasteelpark Arenberg 20, 3001, Leuven, Belgium.
Jan MichielsCentre of Microbial and Plant Genetics, KU Leuven, Kasteelpark Arenberg 20, 3001, Leuven, Belgium.ORCID http://orcid.org/0000-0001-5829-0897
Peter Van LooThe Francis Crick Institute, 1 Midland Road, London, UK.ORCID http://orcid.org/0000-0003-0292-1949
Sandra NuytsLaboratory of Experimental Radiotherapy, Department of Oncology, KU Leuven, UZ Herestraat 49, 3000, Leuven, Belgium.
Philippe PaseroInstitut de Génétique Humaine, CNRS and Université de Montpellier, 141 rue de la Cardonille, Montpellier, France.ORCID http://orcid.org/0000-0001-5891-0822
Michael LisbyDepartment of Biology, University of Copenhagen, Ole Maaloees Vej 5, DK-2200, Copenhagen N, Denmark. mlisby@bio.ku.dk.ORCID http://orcid.org/0000-0002-4830-5247
Kevin J VerstrepenLaboratory of Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium. Kevin.Verstrepen@kuleuven.vib.be.ORCID http://orcid.org/0000-0002-3077-6219
VIB-KU Leuven Center for Microbiology · BECentre National de la Recherche Scientifique · FRUniversitair Ziekenhuis Leuven · BEUniversity of Copenhagen · DKThe Francis Crick Institute · GB

Funding

Cancer Research UK FC001202Medical Research Council FC001202Wellcome Trust FC001202
6 · The paper itself

Abstract

Ethanol is a ubiquitous environmental stressor that is toxic to all lifeforms. Here, we use the model eukaryote Saccharomyces cerevisiae to show that exposure to sublethal ethanol concentrations causes DNA replication stress and an increased mutation rate. Specifically, we find that ethanol slows down replication and affects localization of Mrc1, a conserved protein that helps stabilize the replisome. In addition, ethanol exposure also results in the recruitment of error-prone DNA polymerases to the replication fork. Interestingly, preventing this recruitment through mutagenesis of the PCNA/Pol30 polymerase clamp or deleting specific error-prone polymerases abolishes the mutagenic effect of ethanol. Taken together, this suggests that the mutagenic effect depends on a complex mechanism, where dysfunctional replication forks lead to recruitment of error-prone polymerases. Apart from providing a general mechanistic framework for the mutagenic effect of ethanol, our findings may also provide a route to better understand and prevent ethanol-associated carcinogenesis in higher eukaryotes.

Indexed as

Mutation RateCell Cycle ProteinsCRISPR-Cas SystemsDNA-Directed DNA PolymeraseDNA, FungalDNA ReplicationEthanolMutagenesisMutagenicity TestsProliferating Cell Nuclear AntigenSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsDNA-Directed DNA PolymeraseDNA, FungalEthanolMRC1 protein, S cerevisiaePOL30 protein, S cerevisiaeProliferating Cell Nuclear AntigenSaccharomyces cerevisiae Proteins

Identifiers

PMID32694532
PMCPMC7374746
OpenAlexW3045396963

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.