Evidence map›Paper›PMID 32693143›Full record

ArticleInternational journal of biological macromolecules2020

TNFα regulates intestinal organoids from mice with both defined and conventional microbiota.

Liping Sun, Derrick Rollins, Yijun Qi, Jorrell Fredericks, Thomas J Mansell, Albert Jergens, Gregory J Phillips, Michael Wannemuehler, Qun Wang

Open access · greenAbstract read
In one paragraph

Article in International journal of biological macromolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Liping SunDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, United States; School of Environmental & Resource Sciences, Zhejiang A&F University, Lin'an, Zhejiang 311300, China.
Derrick RollinsDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, United States; Department of Statistics, Iowa State University, Ames, IA, United States.
Yijun QiDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, United States.
Jorrell FredericksDepartment of Veterinary Microbiology and Preventative Medicine, Iowa State University, Ames, IA, United States.
Thomas J MansellDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, United States.
Albert JergensDepartment of Veterinary Clinical Sciences, Iowa State University, Ames, IA, United States.
Gregory J PhillipsDepartment of Veterinary Microbiology and Preventative Medicine, Iowa State University, Ames, IA, United States.
Michael WannemuehlerDepartment of Veterinary Microbiology and Preventative Medicine, Iowa State University, Ames, IA, United States.
Qun WangDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, United States. Electronic address: qunwang@iastate.edu.
Iowa State University · USZhejiang A & F University · CN

Funding

Highly simplified model of a mammalian intestinal communityR01GM099537 · NIGMS · IOWA STATE UNIVERSITY · PI PHILLIPS, JAMES GREGORY · 2013 to 2016
$1.0M
Co-culture of probiotic bacteria for growth factor delivery in minigut organoidsR21GM131189 · NIGMS · IOWA STATE UNIVERSITY · PI MANSELL, THOMAS J · 2018 to 2019
$391k
NIGMS NIH HHS R01 GM099537NIGMS NIH HHS R21 GM131189
6 · The paper itself

Abstract

Cytokines are key factors affecting the fate of intestinal stem cells (ISCs) and effective reagents to manipulate ISCs for research purpose. Tumor necrosis factor alpha (TNFα) is a cytokine produced primarily by monocytes and macrophages. It can induce apoptotic cell death and inflammation, and to inhibit tumorigenesis and viral replication. Additionally, TNFα has been shown to play a critical role in the pathogenesis of inflammatory bowel disease (IBD). It is therefore important to identify the mechanism by which individual cytokines affect particular cell types. For this purpose, we used both conventional (CONV) and altered Schaedler flora (ASF) C3H/HeN mice to elucidate the effect of different microbial populations (complex versus defined) on growth of miniguts derived from two different intestinal environments. Furthermore, we studied the effects of different concentrations of TNFα extracted from the lymph and spleen on the growth and viability of ISCs recovered from mice bearing the ASF or CONV microbiota. The effect of TNFα on miniguts growth depends not only on the source and concentration, but also on the intestinal microenvironment from which the ISCs were derived. The findings suggest that TNFα influences the proliferation of miniguts derived from ISCs and, therefore, modulates mucosal homeostasis of the host.

Indexed as

AnimalsCell ProliferationCells, CulturedCellular MicroenvironmentDisease Models, AnimalDose-Response Relationship, DrugIntestinesLymphMiceOrganoidsPrimary Cell CultureSpleenStem CellsTumor Necrosis Factor-alphaTumor Necrosis Factor-alphaIntestinal organoidsMicrobiotaTNFα

Identifiers

PMID32693143
PMCPMC7657954
OpenAlexW3043277246

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.