Evidence map›Paper›PMID 32691098›Full record

ArticleJournal of mathematical biology2020

Modelling dendritic spines with the finite element method, investigating the impact of geometry on electric and calcic responses.

Frank Boahen, Nicolas Doyon

Abstract read
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In one paragraph

Article in Journal of mathematical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Frank BoahenDépartement de Mathématiques et de Statistique, Université Laval, Pavillon Vachon, 1045 Avenue de la Médecine, Quebec, QC, G1V 0A6, Canada. frank.boahen.1@ulaval.ca.ORCID 0000-0001-8925-408X
Nicolas DoyonDépartement de Mathématiques et de Statistique, Université Laval, Pavillon Vachon, 1045 Avenue de la Médecine, Quebec, QC, G1V 0A6, Canada.
Université Laval · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the relationship between shape and function of dendritic spines is an elusive topic. Several modelling approaches have been used to investigate the interplay between spine geometry, calcium diffusion and electric signalling. We here use a second order finite element method to solve the Poisson-Nernst-Planck equations and describe electrodiffusion in dendritic spines. With this, we obtain relationships between dendritic geometry and calcic as well as electric responses to synaptic events. Our findings support the hypothesis that spine geometry plays a role shaping the electrical responses to synaptic events. Our method was also able to reveal the fine scale distribution of calcium in spines with irregular shapes.

Indexed as

CalciumDendritic SpinesElectromagnetic PhenomenaFinite Element AnalysisAnimalsDiffusionCalciumCalcium signallingDendritic spineElectrodiffusionFinite element methodPoisson–Nernst–Planck equations

Identifiers

PMID32691098
OpenAlexW3045185601

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.