Evidence map›Paper›PMID 32690967›Full record

ArticleNature neuroscience2020

SPARC enables genetic manipulation of precise proportions of cells.

Jesse Isaacman-Beck, Kristine C Paik, Carl F R Wienecke, Helen H Yang, Yvette E Fisher, Irving E Wang, Itzel G Ishida, Gaby Maimon, Rachel I Wilson, Thomas R Clandinin

Abstract read
In one paragraph

Article in Nature neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
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  4. Afterimages drive a shared visual motion-reversal illusion inbioRxiv : the preprint server for biology · 2026
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  12. A hormone-to-neuropeptide pathway inhibits sexual receptivity in immatureProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. The sparse driver system forbioRxiv : the preprint server for biology · 2024
    Article
  18. Inhibitory control of locomotor statistics in walkingbioRxiv : the preprint server for biology · 2024
    Article
  19. BIFROST: A method for registering diverse imaging datasets of theProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jesse Isaacman-BeckDepartment of Neurobiology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-0932-0962
Kristine C PaikDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
Carl F R WieneckeDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
Helen H YangDepartment of Neurobiology and Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA.
Yvette E FisherDepartment of Neurobiology and Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA.
Irving E WangDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
Itzel G IshidaLaboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Gaby MaimonLaboratory of Integrative Brain Function and Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Rachel I WilsonDepartment of Neurobiology and Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8573-9266
Thomas R ClandininDepartment of Neurobiology, Stanford University, Stanford, CA, USA. trc@stanford.edu.ORCID http://orcid.org/0000-0001-6277-6849

Funding

Project 4: Neural Basis of Behavioral SequencesU19NS104655 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI WILSON, RACHEL · 2017 to 2021
$14.6M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Stanford Vision Research CoreP30EY026877 · NEI · STANFORD UNIVERSITY · PI Jeffrey L Goldberg · 2017 to 2026
$8.0M
Dissecting Neural Circuit Computations in the Peripheral Visual SystemR01EY022638 · NEI · STANFORD UNIVERSITY · PI CLANDININ, THOMAS ROBERT · 2012 to 2021
$3.5M
Howard Hughes Medical InstituteNEI NIH HHS P30 EY026877NEI NIH HHS R01 EY022638NIH HHS P40 OD018537NINDS NIH HHS U19 NS104655
6 · The paper itself

Abstract

Many experimental approaches rely on controlling gene expression in select subsets of cells within an individual animal. However, reproducibly targeting transgene expression to specific fractions of a genetically defined cell type is challenging. We developed Sparse Predictive Activity through Recombinase Competition (SPARC), a generalizable toolkit that can express any effector in precise proportions of post-mitotic cells in Drosophila. Using this approach, we demonstrate targeted expression of many effectors in several cell types and apply these tools to calcium imaging of individual neurons and optogenetic manipulation of sparse cell populations in vivo.

Indexed as

Genetic TechniquesNeuronsRecombinasesTransgenesAnimalsDrosophilaRecombinases

Identifiers

PMID32690967
PMCPMC7939234

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.