Evidence map›Paper›PMID 32687508›Full record

ArticlePLoS computational biology2020

Mathematical modeling of plant cell fate transitions controlled by hormonal signals.

Filip Z Klawe, Thomas Stiehl, Peter Bastian, Christophe Gaillochet, Jan U Lohmann, Anna Marciniak-Czochra

Abstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Filip Z KlaweInstitute of Applied Mathematics, Heidelberg University, Heidelberg, Germany.
Thomas StiehlInstitute of Applied Mathematics, Heidelberg University, Heidelberg, Germany.ORCID 0000-0001-9686-9197
Peter BastianInterdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany.
Christophe GaillochetVIB-UGent Center for Plant Systems Biology, Ghent University, Ghent, Belgium.
Jan U LohmannDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, Heidelberg, Germany.ORCID 0000-0003-3667-187X
Anna Marciniak-CzochraInstitute of Applied Mathematics, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-5831-6505

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coordination of fate transition and cell division is crucial to maintain the plant architecture and to achieve efficient production of plant organs. In this paper, we analysed the stem cell dynamics at the shoot apical meristem (SAM) that is one of the plant stem cells locations. We designed a mathematical model to elucidate the impact of hormonal signaling on the fate transition rates between different zones corresponding to slowly dividing stem cells and fast dividing transit amplifying cells. The model is based on a simplified two-dimensional disc geometry of the SAM and accounts for a continuous displacement towards the periphery of cells produced in the central zone. Coupling growth and hormonal signaling results in a nonlinear system of reaction-diffusion equations on a growing domain with the growth rate depending on the model components. The model is tested by simulating perturbations in the level of key transcription factors that maintain SAM homeostasis. The model provides new insights on how the transcription factor HECATE is integrated in the regulatory network that governs stem cell differentiation.

Indexed as

Models, BiologicalPlant CellsCell DifferentiationComputational BiologyComputer SimulationMeristemPlant Growth RegulatorsSignal TransductionPlant Growth Regulators

Identifiers

PMID32687508
PMCPMC7392350

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.