Evidence map›Paper›PMID 32686769›Full record

ArticleScientific reports2020

The complete mitochondrial genome of Indian gaur, Bos gaurus and its phylogenetic implications.

Ranganathan Kamalakkannan, Karippadakam Bhavana, Vandana R Prabhu, Dhandapani Sureshgopi, Hijam Surachandra Singha, Muniyandi Nagarajan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Complete Mitogenome of "Pumpo" (Current issues in molecular biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Mitogenome characterization and phylogeny of Huzhu white yak (Mitochondrial DNA. Part B, Resources · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Characterization of whole mitogenome sequence of the Tongde yak (Mitochondrial DNA. Part B, Resources · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ranganathan Kamalakkannan *Department of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India.ORCID https://orcid.org/0000-0001-8378-4629
Karippadakam Bhavana *Department of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India.ORCID https://orcid.org/0000-0002-8287-9957
Vandana R Prabhu *Department of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India.ORCID https://orcid.org/0000-0002-6302-8022
Dhandapani SureshgopiDepartment of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India.ORCID https://orcid.org/0000-0001-9128-9572
Hijam Surachandra SinghaDepartment of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India.ORCID https://orcid.org/0000-0002-3108-0846
Muniyandi NagarajanDepartment of Genomic Science, School of Biological Sciences, Central University of Kerala, Kasaragod, Kerala, 671316, India. nagarajan@cukerala.ac.in.ORCID https://orcid.org/0000-0001-8328-9767
Central University of Kerala · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gaur is the largest extant cattle species and distributed across South and Southeast Asia. Around 85% of its current global population resides in India, however there has been a gradual decrease in the gaur population over the last two decades due to various anthropogenic activities. Mitochondrial genome is considered as an important tool for species identification and monitoring the populations of conservation concern and therefore it becomes an obligation to sequence the mitochondrial genome of Indian gaur. We report here for the first time 16,345 bp mitochondrial genome of four Indian gaur sequenced using two different approaches. Mitochondrial genome consisted of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. Among the 37 genes, 28 were positioned on the H-strand and 9 were positioned on the L-strand. The overall base composition appeared to be 33.5% A, 27.2% T, 25.9% C and 13.4% G, which yielded a higher AT content. The phylogenetic analysis using complete mitochondrial genome sequences unambiguously suggested that gaur is the maternal ancestor of domestic mithun. Moreover, it also clearly distinguished the three sub species of B. gaurus i.e. B. gaurus gaurus, B. gaurus readei and B. gaurus hubbacki. Among the three sub species, B. gaurus gaurus was genetically closer to B. gaurus readei as compared to B. gaurus hubbacki. The findings of our study provide an insight into the genetic structure and evolutionary history of Indian gaur.

Indexed as

Genome, MitochondrialPhylogenyAnimalsCattleGenes, rRNAGenomicsIndiaOpen Reading FramesRNA, TransferSequence Analysis, DNAUntranslated RegionsWhole Genome SequencingRNA, TransferUntranslated Regions

Identifiers

PMID32686769
PMCPMC7371690
OpenAlexW3043214541

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.