Evidence map›Paper›PMID 32685139›Full record

ArticleLight, science & applications2020

Early detection and classification of live bacteria using time-lapse coherent imaging and deep learning.

Hongda Wang, Hatice Ceylan Koydemir, Yunzhe Qiu, Bijie Bai, Yibo Zhang, Yiyin Jin, Sabiha Tok, Enis Cagatay Yilmaz, Esin Gumustekin, Yair Rivenson and 1 more

Abstract read
In one paragraph

Article in Light, science & applications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
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  5. Self-Powered Sensors for Environmental Monitoring.Nanomaterials (Basel, Switzerland) · 2026
    Review
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  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Hongda Wang *Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.ORCID 0000-0003-0110-5624
Hatice Ceylan Koydemir *Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.ORCID 0000-0002-8612-5167
Yunzhe Qiu *Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Bijie BaiElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Yibo ZhangElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.ORCID 0000-0002-5636-7085
Yiyin JinElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Sabiha TokElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Enis Cagatay YilmazElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Esin GumustekinDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA 90095 USA.
Yair RivensonElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.
Aydogan OzcanElectrical and Computer Engineering Department, University of California, Los Angeles, CA 90095 USA.ORCID 0000-0002-0717-683X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Early identification of pathogenic bacteria in food, water, and bodily fluids is very important and yet challenging, owing to sample complexities and large sample volumes that need to be rapidly screened. Existing screening methods based on plate counting or molecular analysis present various tradeoffs with regard to the detection time, accuracy/sensitivity, cost, and sample preparation complexity. Here, we present a computational live bacteria detection system that periodically captures coherent microscopy images of bacterial growth inside a 60-mm-diameter agar plate and analyses these time-lapsed holograms using deep neural networks for the rapid detection of bacterial growth and the classification of the corresponding species. The performance of our system was demonstrated by the rapid detection of

Indexed as

BiophotonicsImaging and sensingMicroscopy

Identifiers

PMID32685139
PMCPMC7351775

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.