Evidence map›Paper›PMID 32682401›Full record

ArticleBMC cardiovascular disorders2020

Association of ESR1 (rs2234693 and rs9340799), CETP (rs708272), MTHFR (rs1801133 and rs2274976) and MS (rs185087) polymorphisms with Coronary Artery Disease (CAD).

Jyotdeep Kour Raina, Minakashee Sharma, Rakesh Kumar Panjaliya, Vikas Dogra, Ashok Bakaya, Parvinder Kumar

Open access · goldAbstract read
In one paragraph

Article in BMC cardiovascular disorders, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  3. Article
  4. Article
  5. Review
  6. Article
  7. Cholesterol Ester Transfer ProteinIranian journal of medical sciences · 2024
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  8. Article
  9. Article
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  12. International journal of cardiology. Heart & vasculature · 2023
    Article
  13. Association ofInternational journal of molecular sciences · 2023
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  14. Review
  15. Article
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  19. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jyotdeep Kour RainaInstitute of Human Genetics, University of Jammu, Jammu, JandK, 180006, India.
Minakashee SharmaInstitute of Human Genetics, University of Jammu, Jammu, JandK, 180006, India.
Rakesh Kumar PanjaliyaHuman Genetics Lab, Department of Zoology, University of Jammu, Jammu, JandK, India. panjaliya82@gmail.com.ORCID 0000-0002-0015-6027
Vikas DograDepartment of Zoology, Government Degree College, Samba, JandK, India.
Ashok BakayaDepartment of Cardiology, Acharaya Shri Chander College of Medical Sciences (ASCOMS) and Hospital, Sidhra, Jammu, JandK, India.
Parvinder KumarInstitute of Human Genetics, University of Jammu, Jammu, JandK, 180006, India.
University of Jammu · INAcharya Shri Chander College of Medical Sciences and Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCoronary artery disease (CAD) is a complex disease resulting from the cumulative and interactive effects of large number of genes along with environmental exposure. Therefore, the present study was envisaged as an effort to study the association of candidate genes ESR1 (rs2234693 and rs9340799), CETP (rs708272), MTHFR (rs1801133 and rs2274976) and MS (rs185087) polymorphisms with the risk of CAD, targeting the populations of Jammu (JandK).

methodA total of 400 confirmed CAD patients and 400 healthy controls were enrolled for the present study. Genotyping was done by polymerase chain reaction- restriction fragment length polymorphism (PCR-RFLP).

resultsESR1 gene (rs9340799) polymorphism was found to be associated with CAD in all the genetic models. The haplotype analysis of ESR1 (rs2234693 and rs9340799) gene revealed that C-G haplotype was conferring approximately 5-fold risk and T-A haplotype was adding 1.4-fold risk towards the disease. 'T' allele of MTHFR rs1801133 SNP was observed to be responsible for development of CAD in our study population (p < 0.0001). In case of MTHFR (rs1801133 and rs2274976) gene, the haplotype T-G was observed to confer 4.7-fold risk towards CAD whereas haplotype C-G provided nearly a 1.7 fold protection towards development of CAD. For MS gene, rs185087 was also found to be associated with CAD in a co-dominant (p = 0.003 and p = 0.03), dominant (p = 0.001) and allelic models (p = 0.001). The gene-gene interaction revealed strong epistasis between single nucleotide polymorphisms (SNPs), ESR1 rs9340799 and MTHFR rs2274976. Furthermore, the dendrogram for gene-environment dataset indicated moderately synergistic interaction between CETP rs708272 and physical inactivity.

conclusionIn the study under reference, a significant association of ESR1-XbaI (rs9340799), MTHFR C677T (rs1801133) and MS A2756G (rs185087) gene polymorphisms with the susceptibility of CAD in the population of Jammu region (JandK) has been observed.

Indexed as

Polymorphism, Single Nucleotide5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseCase-Control StudiesCholesterol Ester Transfer ProteinsCoronary Artery DiseaseEstrogen Receptor alphaGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseHaplotypesHumansIndiaMethylenetetrahydrofolate Reductase (NADPH2)Risk AssessmentRisk Factors5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseCETP protein, humanCholesterol Ester Transfer ProteinsESR1 protein, humanEstrogen Receptor alphaMethylenetetrahydrofolate Reductase (NADPH2)MTHFR protein, humanMTR protein, humanCADCETPESR1MSMTHFRPolymorphism

Identifiers

PMID32682401
PMCPMC7368753
OpenAlexW3042764613

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.