ArticleBMC genomics2020
Integrated small RNA and Degradome sequencing provide insights into salt tolerance in sesame (Sesamum indicum L.).
Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed, 33 citations in OpenAlex.
- miRNA-mRNA integrated analysis reveals candidate genes associated with salt stress response in HalophyticRNA biology · 2025Article
- Genome-wide identification, classification, and expression profiling of LAC gene family in sesame.BMC plant biology · 2024Article
- Omics technologies towards sesame improvement: a review.Molecular biology reports · 2023Review
- Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement.International journal of molecular sciences · 2023Review
- Article
- Multi-omics reveals the key and specific miRNA-mRNA modules underlying salt tolerance in wild emmer wheat (Triticum dicoccoides L.).BMC genomics · 2022Article
- Integrated Analysis of Transcriptome and Small RNAome Reveals the Regulatory Network for Rapid Growth inInternational journal of molecular sciences · 2022Article
- Current Research Trends and Prospects for Yield and Quality Improvement in Sesame, an Important Oilseed Crop.Frontiers in plant science · 2022Review
- MicroRNA and Degradome Profiling Uncover Defense Response ofFrontiers in plant science · 2022Article
- Integration of Small RNA and Degradome Sequencing Reveals the Regulatory Network of Al-Induced Programmed Cell Death in Peanut.International journal of molecular sciences · 2021Article
- Identification of Novel miRNAs and Their Target Genes in the Response to Abscisic Acid inInternational journal of molecular sciences · 2021Article
- Identification and Functional Characterization of Plant MiRNA Under Salt Stress Shed Light on Salinity Resistance Improvement Through MiRNA Manipulation in Crops.Frontiers in plant science · 2021Review
- Integration of miRNAs, Degradome, and Transcriptome Omics Uncovers a Complex Regulatory Network and Provides Insights Into Lipid and Fatty Acid Synthesis During Sesame Seed Development.Frontiers in plant science · 2021Article
Corrections and comments
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Authors and funding
7 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundMicroRNAs (miRNAs) exhibit important regulatory roles in the response to abiotic stresses by post-transcriptionally regulating the target gene expression in plants. However, their functions in sesame response to salt stress are poorly known. To dissect the complex mechanisms underlying salt stress response in sesame, miRNAs and their targets were identified from two contrasting sesame genotypes by a combined analysis of small RNAs and degradome sequencing.
resultsA total of 351 previously known and 91 novel miRNAs were identified from 18 sesame libraries. Comparison of miRNA expressions between salt-treated and control groups revealed that 116 miRNAs were involved in salt stress response. Using degradome sequencing, potential target genes for some miRNAs were also identified. The combined analysis of all the differentially expressed miRNAs and their targets identified miRNA-mRNA regulatory networks and 21 miRNA-mRNA interaction pairs that exhibited contrasting expressions in sesame under salt stress.
conclusionsThis comprehensive integrated analysis may provide new insights into the genetic regulation mechanism of miRNAs underlying the adaptation of sesame to salt stress.
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